(8 nodes) Cation efflux protein network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2XKP7_CIOIN	Uncharacterized protein. (379 aa)
	F6Z370_CIOIN	Uncharacterized protein. (372 aa)
	F6YYY1_CIOIN	Uncharacterized protein. (720 aa)
	F6T8Y3_CIOIN	Uncharacterized protein. (344 aa)
	F6SWY4_CIOIN	Uncharacterized protein. (393 aa)
	F6QGV6_CIOIN	Uncharacterized protein. (379 aa)
	F6ZU53_CIOIN	Uncharacterized protein. (449 aa)
	H2XKK7_CIOIN	Uncharacterized protein. (436 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6QGV6_CIOIN	F6SWY4_CIOIN	ENSCINP00000016928	ENSCINP00000014615	Uncharacterized protein.	Uncharacterized protein.	0.414
F6QGV6_CIOIN	F6T8Y3_CIOIN	ENSCINP00000016928	ENSCINP00000003497	Uncharacterized protein.	Uncharacterized protein.	0.502
F6QGV6_CIOIN	F6YYY1_CIOIN	ENSCINP00000016928	ENSCINP00000012252	Uncharacterized protein.	Uncharacterized protein.	0.801
F6QGV6_CIOIN	F6Z370_CIOIN	ENSCINP00000016928	ENSCINP00000008169	Uncharacterized protein.	Uncharacterized protein.	0.414
F6QGV6_CIOIN	F6ZU53_CIOIN	ENSCINP00000016928	ENSCINP00000021895	Uncharacterized protein.	Uncharacterized protein.	0.525
F6SWY4_CIOIN	F6QGV6_CIOIN	ENSCINP00000014615	ENSCINP00000016928	Uncharacterized protein.	Uncharacterized protein.	0.414
F6T8Y3_CIOIN	F6QGV6_CIOIN	ENSCINP00000003497	ENSCINP00000016928	Uncharacterized protein.	Uncharacterized protein.	0.502
F6YYY1_CIOIN	F6QGV6_CIOIN	ENSCINP00000012252	ENSCINP00000016928	Uncharacterized protein.	Uncharacterized protein.	0.801
F6YYY1_CIOIN	F6ZU53_CIOIN	ENSCINP00000012252	ENSCINP00000021895	Uncharacterized protein.	Uncharacterized protein.	0.521
F6Z370_CIOIN	F6QGV6_CIOIN	ENSCINP00000008169	ENSCINP00000016928	Uncharacterized protein.	Uncharacterized protein.	0.414
F6ZU53_CIOIN	F6QGV6_CIOIN	ENSCINP00000021895	ENSCINP00000016928	Uncharacterized protein.	Uncharacterized protein.	0.525
F6ZU53_CIOIN	F6YYY1_CIOIN	ENSCINP00000021895	ENSCINP00000012252	Uncharacterized protein.	Uncharacterized protein.	0.521
F6ZU53_CIOIN	H2XKP7_CIOIN	ENSCINP00000021895	ENSCINP00000030229	Uncharacterized protein.	Uncharacterized protein.	0.531
H2XKP7_CIOIN	F6ZU53_CIOIN	ENSCINP00000030229	ENSCINP00000021895	Uncharacterized protein.	Uncharacterized protein.	0.531