(57 nodes) Zinc finger, FYVE/PHD-type network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Ci-ZF(FYVE)-5	Zinc finger protein. (607 aa)
	F6XJU3_CIOIN	Uncharacterized protein. (1922 aa)
	F6U959_CIOIN	Uncharacterized protein. (948 aa)
	zf(nfx1)	Zinc finger protein isoform X1. (889 aa)
	F6VU73_CIOIN	SET domain-containing protein. (453 aa)
	F6VRM1_CIOIN	Uncharacterized protein. (181 aa)
	LOC100186391	Uncharacterized protein LOC100186391. (466 aa)
	F6XZR7_CIOIN	Uncharacterized protein. (543 aa)
	Zf(fyve)-6	Uncharacterized protein. (1125 aa)
	F6UZ84_CIOIN	Mtf2_C domain-containing protein. (374 aa)
	F6TY64_CIOIN	Uncharacterized protein. (388 aa)
	Zf(phd)-26	PHD-type domain-containing protein. (257 aa)
	zf(fyve)-1	Zinc finger protein. (402 aa)
	H2XJT4_CIOIN	PHD-type domain-containing protein. (508 aa)
	ci-zf(phd)-21	Uncharacterized protein. (1298 aa)
	Ci-ZF(FYVE)-10	Zinc finger protein. (375 aa)
	H2XPI7_CIOIN	Tudor domain-containing protein. (264 aa)
	H2XQ00_CIOIN	PHD-type domain-containing protein. (174 aa)
	H2XQB7_CIOIN	PHD-type domain-containing protein. (164 aa)
	H2XT15_CIOIN	PHD-type domain-containing protein. (343 aa)
	zf(fyve)-2	Zinc finger protein. (237 aa)
	H2XTY2_CIOIN	Uncharacterized protein. (882 aa)
	Uhrf2	Uncharacterized protein. (743 aa)
	H2XVG1_CIOIN	PHD-type domain-containing protein. (143 aa)
	zf(c2h2)-17	Zinc finger protein isoform X1. (399 aa)
	H2XXT7_CIOIN	PHD-type domain-containing protein. (435 aa)
	Zf(c2h2)-137	PHD domain-containing protein. (351 aa)
	H2XYY2_CIOIN	PHD domain-containing protein. (73 aa)
	H2XZA5_CIOIN	PHD domain-containing protein. (103 aa)
	H2XZC2_CIOIN	Uncharacterized protein. (245 aa)
	H2Y0G6_CIOIN	Uncharacterized protein. (532 aa)
	H2Y371_CIOIN	FYVE-type domain-containing protein. (419 aa)
	F6ZDZ6_CIOIN	Uncharacterized protein. (462 aa)
	LOC778828	Uncharacterized protein. (818 aa)
	F6WWY7_CIOIN	KIND domain-containing protein. (615 aa)
	F6R7T5_CIOIN	Uncharacterized protein. (1533 aa)
	Af10-like	Uncharacterized protein. (520 aa)
	F6RU68_CIOIN	N-acetyltransferase domain-containing protein. (702 aa)
	LOC100175841	Putative E3 ubiquitin-protein ligase UBR7. (402 aa)
	zf(fyve)-11	Uncharacterized protein. (717 aa)
	F6UCG6_CIOIN	FYVE-type domain-containing protein. (742 aa)
	LOC100184129	Inhibitor of growth protein. (240 aa)
	F6SFQ0_CIOIN	Uncharacterized protein. (1520 aa)
	F6RGF8_CIOIN	Uncharacterized protein. (518 aa)
	LOC100182608	Uncharacterized protein. (292 aa)
	F6VYS2_CIOIN	Uncharacterized protein. (1202 aa)
	F6VYS8_CIOIN	Uncharacterized protein. (445 aa)
	F6XEQ3_CIOIN	Uncharacterized protein. (490 aa)
	LOC100183795	Inhibitor of growth protein. (401 aa)
	zf(fyve)-9	Zinc finger protein ZF9. (258 aa)
	F6YG06_CIOIN	RabBD domain-containing protein. (352 aa)
	F6PH84_CIOIN	Uncharacterized protein. (468 aa)
	zf(phd)-1	Uncharacterized protein. (667 aa)
	LOC100182325	Inhibitor of growth protein. (344 aa)
	zf(fyve)-7	Zinc finger (FYVE)-7. (644 aa)
	F6Q8V1_CIOIN	FYVE-type domain-containing protein. (243 aa)
	F6XLA1_CIOIN	Uncharacterized protein. (1219 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ci-ZF(FYVE)-5	F6Q8V1_CIOIN	ENSCINP00000008513	ENSCINP00000004983	Zinc finger protein.	FYVE-type domain-containing protein.	0.525
F6Q8V1_CIOIN	Ci-ZF(FYVE)-5	ENSCINP00000004983	ENSCINP00000008513	FYVE-type domain-containing protein.	Zinc finger protein.	0.525
F6Q8V1_CIOIN	F6XJU3_CIOIN	ENSCINP00000004983	ENSCINP00000021674	FYVE-type domain-containing protein.	Uncharacterized protein.	0.447
F6R7T5_CIOIN	F6SFQ0_CIOIN	ENSCINP00000018331	ENSCINP00000012442	Uncharacterized protein.	Uncharacterized protein.	0.410
F6R7T5_CIOIN	F6VU73_CIOIN	ENSCINP00000018331	ENSCINP00000024302	Uncharacterized protein.	SET domain-containing protein.	0.436
F6R7T5_CIOIN	F6XLA1_CIOIN	ENSCINP00000018331	ENSCINP00000007020	Uncharacterized protein.	Uncharacterized protein.	0.455
F6R7T5_CIOIN	H2XTY2_CIOIN	ENSCINP00000018331	ENSCINP00000033116	Uncharacterized protein.	Uncharacterized protein.	0.402
F6R7T5_CIOIN	H2Y0G6_CIOIN	ENSCINP00000018331	ENSCINP00000035400	Uncharacterized protein.	Uncharacterized protein.	0.539
F6R7T5_CIOIN	LOC100182325	ENSCINP00000018331	ENSCINP00000002250	Uncharacterized protein.	Inhibitor of growth protein.	0.411
F6R7T5_CIOIN	LOC100182608	ENSCINP00000018331	ENSCINP00000011053	Uncharacterized protein.	Uncharacterized protein.	0.559
F6R7T5_CIOIN	LOC100183795	ENSCINP00000018331	ENSCINP00000007229	Uncharacterized protein.	Inhibitor of growth protein.	0.606
F6R7T5_CIOIN	LOC100184129	ENSCINP00000018331	ENSCINP00000012930	Uncharacterized protein.	Inhibitor of growth protein.	0.584
F6RGF8_CIOIN	F6XLA1_CIOIN	ENSCINP00000011985	ENSCINP00000007020	Uncharacterized protein.	Uncharacterized protein.	0.601
F6SFQ0_CIOIN	F6R7T5_CIOIN	ENSCINP00000012442	ENSCINP00000018331	Uncharacterized protein.	Uncharacterized protein.	0.410
F6SFQ0_CIOIN	F6UZ84_CIOIN	ENSCINP00000012442	ENSCINP00000026271	Uncharacterized protein.	Mtf2_C domain-containing protein.	0.496
F6SFQ0_CIOIN	F6VU73_CIOIN	ENSCINP00000012442	ENSCINP00000024302	Uncharacterized protein.	SET domain-containing protein.	0.408
F6SFQ0_CIOIN	H2XPI7_CIOIN	ENSCINP00000012442	ENSCINP00000031571	Uncharacterized protein.	Tudor domain-containing protein.	0.496
F6SFQ0_CIOIN	H2XXT7_CIOIN	ENSCINP00000012442	ENSCINP00000034471	Uncharacterized protein.	PHD-type domain-containing protein.	0.496
F6SFQ0_CIOIN	ci-zf(phd)-21	ENSCINP00000012442	ENSCINP00000029983	Uncharacterized protein.	Uncharacterized protein.	0.719
F6TY64_CIOIN	F6ZDZ6_CIOIN	ENSCINP00000027192	ENSCINP00000021230	Uncharacterized protein.	Uncharacterized protein.	0.522