STRINGSTRING
LOC100176092-2 LOC100176092-2 LOC100179909 LOC100179909 LOC100176092 LOC100176092 F6WXG6_CIOIN F6WXG6_CIOIN F6Z3D0_CIOIN F6Z3D0_CIOIN LOC100187119 LOC100187119
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100176092-2Cathepsin L1-like isoform X1; Belongs to the peptidase C1 family. (330 aa)
LOC100179909Uncharacterized protein; Belongs to the peptidase C1 family. (341 aa)
LOC100176092Cathepsin L1-like isoform X3; Belongs to the peptidase C1 family. (327 aa)
F6WXG6_CIOINUncharacterized protein; Belongs to the peptidase C1 family. (333 aa)
F6Z3D0_CIOINUncharacterized protein; Belongs to the peptidase C1 family. (338 aa)
LOC100187119Uncharacterized protein; Belongs to the peptidase C1 family. (335 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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