(8 nodes) FAD-binding, type PCMH, subdomain 2 network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6V519_CIOIN	Uncharacterized protein. (1136 aa)
	LOC100181350	Uncharacterized protein. (1356 aa)
	LOC100186045	FAD-binding PCMH-type domain-containing protein. (470 aa)
	LOC100181207	FAD-binding PCMH-type domain-containing protein. (1305 aa)
	LOC100175580	Alkylglycerone-phosphate synthase; Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids; Belongs to the FAD-binding oxidoreductase/transferase type 4 family. (588 aa)
	F6W0L1_CIOIN	FAD-binding PCMH-type domain-containing protein. (509 aa)
	LOC100181233	Delta(24)-sterol reductase-like. (513 aa)
	F6ZXA7_CIOIN	FAD-binding PCMH-type domain-containing protein. (524 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6V519_CIOIN	LOC100181207	ENSCINP00000012380	ENSCINP00000031513	Uncharacterized protein.	FAD-binding PCMH-type domain-containing protein.	0.915
F6V519_CIOIN	LOC100181350	ENSCINP00000012380	ENSCINP00000018790	Uncharacterized protein.	Uncharacterized protein.	0.901
F6ZXA7_CIOIN	LOC100181233	ENSCINP00000014088	ENSCINP00000024565	FAD-binding PCMH-type domain-containing protein.	Delta(24)-sterol reductase-like.	0.905
LOC100181207	F6V519_CIOIN	ENSCINP00000031513	ENSCINP00000012380	FAD-binding PCMH-type domain-containing protein.	Uncharacterized protein.	0.915
LOC100181207	LOC100181350	ENSCINP00000031513	ENSCINP00000018790	FAD-binding PCMH-type domain-containing protein.	Uncharacterized protein.	0.912
LOC100181233	F6ZXA7_CIOIN	ENSCINP00000024565	ENSCINP00000014088	Delta(24)-sterol reductase-like.	FAD-binding PCMH-type domain-containing protein.	0.905
LOC100181350	F6V519_CIOIN	ENSCINP00000018790	ENSCINP00000012380	Uncharacterized protein.	Uncharacterized protein.	0.901
LOC100181350	LOC100181207	ENSCINP00000018790	ENSCINP00000031513	Uncharacterized protein.	FAD-binding PCMH-type domain-containing protein.	0.912