(4 nodes) Folate receptor-like network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F7AWH6_CIOIN	Folate_rec domain-containing protein. (230 aa)
	LOC100183675	Folate_rec domain-containing protein. (257 aa)
	LOC100178138	Hedgehog-interacting protein-like. (240 aa)
	LOC100178291	Folate receptor gamma. (338 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F7AWH6_CIOIN	LOC100178291	ENSCINP00000023027	ENSCINP00000012310	Folate_rec domain-containing protein.	Folate receptor gamma.	0.913
F7AWH6_CIOIN	LOC100183675	ENSCINP00000023027	ENSCINP00000022914	Folate_rec domain-containing protein.	Folate_rec domain-containing protein.	0.913
LOC100178291	F7AWH6_CIOIN	ENSCINP00000012310	ENSCINP00000023027	Folate receptor gamma.	Folate_rec domain-containing protein.	0.913
LOC100178291	LOC100183675	ENSCINP00000012310	ENSCINP00000022914	Folate receptor gamma.	Folate_rec domain-containing protein.	0.905
LOC100183675	F7AWH6_CIOIN	ENSCINP00000022914	ENSCINP00000023027	Folate_rec domain-containing protein.	Folate_rec domain-containing protein.	0.913
LOC100183675	LOC100178291	ENSCINP00000022914	ENSCINP00000012310	Folate_rec domain-containing protein.	Folate receptor gamma.	0.905