(13 nodes) Periplasmic binding protein-like I network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6XD67_CIOIN	ANF_receptor domain-containing protein. (252 aa)
	F6RPN1_CIOIN	G_PROTEIN_RECEP_F3_4 domain-containing protein. (737 aa)
	LOC100178228	ANF_receptor domain-containing protein. (426 aa)
	F6XSE6_CIOIN	G_PROTEIN_RECEP_F3_4 domain-containing protein. (777 aa)
	F6R5J0_CIOIN	ANF_receptor domain-containing protein. (186 aa)
	F7AQ62_CIOIN	G_PROTEIN_RECEP_F3_4 domain-containing protein. (769 aa)
	F7BFE1_CIOIN	G_PROTEIN_RECEP_F3_4 domain-containing protein. (809 aa)
	F6SW71_CIOIN	Guanylate cyclase. (988 aa)
	F6W4K8_CIOIN	Uncharacterized protein. (835 aa)
	F6TPD4_CIOIN	Uncharacterized protein. (813 aa)
	F6WZZ7_CIOIN	Guanylate cyclase. (956 aa)
	F7AA31_CIOIN	G_PROTEIN_RECEP_F3_4 domain-containing protein. (906 aa)
	LOC100177156	Guanylate cyclase. (1026 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6RPN1_CIOIN	F6XSE6_CIOIN	ENSCINP00000025414	ENSCINP00000005140	G_PROTEIN_RECEP_F3_4 domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.479
F6RPN1_CIOIN	F7AQ62_CIOIN	ENSCINP00000025414	ENSCINP00000006905	G_PROTEIN_RECEP_F3_4 domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.456
F6RPN1_CIOIN	F7BFE1_CIOIN	ENSCINP00000025414	ENSCINP00000011016	G_PROTEIN_RECEP_F3_4 domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.461
F6TPD4_CIOIN	F6W4K8_CIOIN	ENSCINP00000017550	ENSCINP00000016355	Uncharacterized protein.	Uncharacterized protein.	0.666
F6TPD4_CIOIN	F7AQ62_CIOIN	ENSCINP00000017550	ENSCINP00000006905	Uncharacterized protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.408
F6TPD4_CIOIN	F7BFE1_CIOIN	ENSCINP00000017550	ENSCINP00000011016	Uncharacterized protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.556
F6W4K8_CIOIN	F6TPD4_CIOIN	ENSCINP00000016355	ENSCINP00000017550	Uncharacterized protein.	Uncharacterized protein.	0.666
F6XSE6_CIOIN	F6RPN1_CIOIN	ENSCINP00000005140	ENSCINP00000025414	G_PROTEIN_RECEP_F3_4 domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.479
F6XSE6_CIOIN	F7AQ62_CIOIN	ENSCINP00000005140	ENSCINP00000006905	G_PROTEIN_RECEP_F3_4 domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.440
F6XSE6_CIOIN	F7BFE1_CIOIN	ENSCINP00000005140	ENSCINP00000011016	G_PROTEIN_RECEP_F3_4 domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.694
F7AA31_CIOIN	F7AQ62_CIOIN	ENSCINP00000004243	ENSCINP00000006905	G_PROTEIN_RECEP_F3_4 domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.418
F7AQ62_CIOIN	F6RPN1_CIOIN	ENSCINP00000006905	ENSCINP00000025414	G_PROTEIN_RECEP_F3_4 domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.456
F7AQ62_CIOIN	F6TPD4_CIOIN	ENSCINP00000006905	ENSCINP00000017550	G_PROTEIN_RECEP_F3_4 domain-containing protein.	Uncharacterized protein.	0.408
F7AQ62_CIOIN	F6XSE6_CIOIN	ENSCINP00000006905	ENSCINP00000005140	G_PROTEIN_RECEP_F3_4 domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.440
F7AQ62_CIOIN	F7AA31_CIOIN	ENSCINP00000006905	ENSCINP00000004243	G_PROTEIN_RECEP_F3_4 domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.418
F7AQ62_CIOIN	F7BFE1_CIOIN	ENSCINP00000006905	ENSCINP00000011016	G_PROTEIN_RECEP_F3_4 domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.456
F7BFE1_CIOIN	F6RPN1_CIOIN	ENSCINP00000011016	ENSCINP00000025414	G_PROTEIN_RECEP_F3_4 domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.461
F7BFE1_CIOIN	F6TPD4_CIOIN	ENSCINP00000011016	ENSCINP00000017550	G_PROTEIN_RECEP_F3_4 domain-containing protein.	Uncharacterized protein.	0.556
F7BFE1_CIOIN	F6XSE6_CIOIN	ENSCINP00000011016	ENSCINP00000005140	G_PROTEIN_RECEP_F3_4 domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.694
F7BFE1_CIOIN	F7AQ62_CIOIN	ENSCINP00000011016	ENSCINP00000006905	G_PROTEIN_RECEP_F3_4 domain-containing protein.	G_PROTEIN_RECEP_F3_4 domain-containing protein.	0.456