(8 nodes) CAP Gly-rich domain superfamily network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6ZBN8_CIOIN	CAP-Gly domain-containing protein. (292 aa)
	H2XMT6_CIOIN	Uncharacterized protein. (462 aa)
	H2XNK3_CIOIN	Uncharacterized protein. (1478 aa)
	LOC100183278	Tubulin-folding cofactor B. (246 aa)
	F6PHM0_CIOIN	Uncharacterized protein. (498 aa)
	F7A4V3_CIOIN	Uncharacterized protein. (542 aa)
	F7B690_CIOIN	CAP-Gly domain-containing protein. (1092 aa)
	H2XK14_CIOIN	CAP-Gly domain-containing protein. (94 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6PHM0_CIOIN	H2XMT6_CIOIN	ENSCINP00000006295	ENSCINP00000030969	Uncharacterized protein.	Uncharacterized protein.	0.561
F6ZBN8_CIOIN	H2XMT6_CIOIN	ENSCINP00000026477	ENSCINP00000030969	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.561
F7A4V3_CIOIN	LOC100183278	ENSCINP00000010437	ENSCINP00000035668	Uncharacterized protein.	Tubulin-folding cofactor B.	0.753
F7B690_CIOIN	H2XNK3_CIOIN	ENSCINP00000010951	ENSCINP00000031236	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.851
H2XMT6_CIOIN	F6PHM0_CIOIN	ENSCINP00000030969	ENSCINP00000006295	Uncharacterized protein.	Uncharacterized protein.	0.561
H2XMT6_CIOIN	F6ZBN8_CIOIN	ENSCINP00000030969	ENSCINP00000026477	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.561
H2XNK3_CIOIN	F7B690_CIOIN	ENSCINP00000031236	ENSCINP00000010951	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.851
LOC100183278	F7A4V3_CIOIN	ENSCINP00000035668	ENSCINP00000010437	Tubulin-folding cofactor B.	Uncharacterized protein.	0.753