STRINGSTRING
LOC100183815 LOC100183815 F6TAH1_CIOIN F6TAH1_CIOIN F7BBK7_CIOIN F7BBK7_CIOIN F6YW02_CIOIN F6YW02_CIOIN LOC100183557 LOC100183557 F6WVH9_CIOIN F6WVH9_CIOIN LOC100175450 LOC100175450
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100183815Peroxisomal sarcosine oxidase-like isoform X3. (393 aa)
F6TAH1_CIOINDAO domain-containing protein. (152 aa)
F7BBK7_CIOINDAO domain-containing protein. (124 aa)
F6YW02_CIOINDAO domain-containing protein. (363 aa)
LOC100183557DAO domain-containing protein. (312 aa)
F6WVH9_CIOINAmine oxidase. (396 aa)
LOC100175450DAO domain-containing protein. (299 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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