STRINGSTRING
LOC100187540 LOC100187540 F6U1K7_CIOIN F6U1K7_CIOIN LOC101242392 LOC101242392 LOC100177596 LOC100177596 F7B4V3_CIOIN F7B4V3_CIOIN F6XF93_CIOIN F6XF93_CIOIN LOC100184003 LOC100184003 F6R3K6_CIOIN F6R3K6_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100187540Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (235 aa)
F6U1K7_CIOINRBR-type E3 ubiquitin transferase. (510 aa)
LOC101242392Eukaryotic translation initiation factor 4E type 2; Belongs to the eukaryotic initiation factor 4E family. (219 aa)
LOC100177596Eukaryotic initiation factor 4A-I; Belongs to the DEAD box helicase family. (430 aa)
F7B4V3_CIOINUncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (225 aa)
F6XF93_CIOINUncharacterized protein. (410 aa)
LOC100184003Importin subunit alpha; Belongs to the importin alpha family. (519 aa)
F6R3K6_CIOINUncharacterized protein. (1037 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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