STRINGSTRING
LOC100179599 LOC100179599 F7AQT2_CIOIN F7AQT2_CIOIN LOC100176009 LOC100176009 LOC100179564 LOC100179564 LOC100186854 LOC100186854 LOC100180193 LOC100180193 H2XMX5_CIOIN H2XMX5_CIOIN H2XPT7_CIOIN H2XPT7_CIOIN H2XTZ7_CIOIN H2XTZ7_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100179599Uncharacterized protein. (381 aa)
F7AQT2_CIOINUncharacterized protein. (312 aa)
LOC100176009cAMP-dependent protein kinase catalytic subunit alpha isoform X1; Belongs to the protein kinase superfamily. (367 aa)
LOC100179564cAMP-dependent protein kinase type II regulatory subunit-like isoform X1. (394 aa)
LOC100186854THAP domain-containing protein 1-like. (260 aa)
LOC100180193Uncharacterized protein LOC100180193 isoform X2. (585 aa)
H2XMX5_CIOINCyclic nucleotide-binding domain-containing protein. (366 aa)
H2XPT7_CIOINUncharacterized protein. (105 aa)
H2XTZ7_CIOINCyclic nucleotide-binding domain-containing protein. (193 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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