STRINGSTRING
LOC104265605 LOC104265605 Tcf/lef Tcf/lef F6RL41_CIOIN F6RL41_CIOIN LOC100183367 LOC100183367 Cibeta-catenin Cibeta-catenin LOC494392 LOC494392 groucho1 groucho1 groucho2 groucho2 F6R7T5_CIOIN F6R7T5_CIOIN LOC100187276 LOC100187276 Ash2-like Ash2-like F6WY47_CIOIN F6WY47_CIOIN F6TZA7_CIOIN F6TZA7_CIOIN H2XQ36_CIOIN H2XQ36_CIOIN H2XUU5_CIOIN H2XUU5_CIOIN H2Y0L0_CIOIN H2Y0L0_CIOIN H2Y2Q0_CIOIN H2Y2Q0_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC104265605Uncharacterized protein. (575 aa)
Tcf/lefHMG box domain-containing protein. (351 aa)
F6RL41_CIOINFAT domain-containing protein. (2944 aa)
LOC100183367RuvB-like helicase; Belongs to the RuvB family. (456 aa)
Cibeta-cateninUncharacterized protein. (497 aa)
LOC494392Uncharacterized protein LOC494392. (131 aa)
groucho1Groucho. (847 aa)
groucho2Uncharacterized protein. (835 aa)
F6R7T5_CIOINUncharacterized protein. (1533 aa)
LOC100187276Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (904 aa)
Ash2-likeB30.2/SPRY domain-containing protein. (352 aa)
F6WY47_CIOINWD_REPEATS_REGION domain-containing protein. (519 aa)
F6TZA7_CIOINUncharacterized protein. (273 aa)
H2XQ36_CIOINUncharacterized protein. (312 aa)
H2XUU5_CIOINUncharacterized protein. (532 aa)
H2Y0L0_CIOINFAT domain-containing protein. (303 aa)
H2Y2Q0_CIOINFATC domain-containing protein; Belongs to the PI3/PI4-kinase family. (450 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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