STRINGSTRING
LOC100177697 LOC100177697 F6YRG2_CIOIN F6YRG2_CIOIN F6ZNL7_CIOIN F6ZNL7_CIOIN LOC100180053 LOC100180053 LOC100187076 LOC100187076 F7A8L8_CIOIN F7A8L8_CIOIN LOC100183005 LOC100183005 LOC100179243 LOC100179243 F6WU12_CIOIN F6WU12_CIOIN F6QRU4_CIOIN F6QRU4_CIOIN H2XKH1_CIOIN H2XKH1_CIOIN LOC100178517 LOC100178517 H2Y2K5_CIOIN H2Y2K5_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100177697Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (236 aa)
F6YRG2_CIOINCaveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (211 aa)
F6ZNL7_CIOINFH2 domain-containing protein. (158 aa)
LOC100180053zf-NOSIP domain-containing protein. (300 aa)
LOC100187076ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (622 aa)
F7A8L8_CIOINUncharacterized protein. (519 aa)
LOC100183005Neuroglobin-like; Belongs to the globin family. (159 aa)
LOC100179243N(G),N(G)-dimethylarginine dimethylaminohydrolase 1-like isoform X1. (281 aa)
F6WU12_CIOINUncharacterized protein. (254 aa)
F6QRU4_CIOINUncharacterized protein. (274 aa)
H2XKH1_CIOINFH2 domain-containing protein. (302 aa)
LOC100178517Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (142 aa)
H2Y2K5_CIOINATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (549 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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