(5 nodes) Linoleic acid (LA) metabolism network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100176701	Elongation of very long chain fatty acids protein. (272 aa)
	H2XMQ5_CIOIN	Elongation of very long chain fatty acids protein. (276 aa)
	LOC100182900	Elongation of very long chain fatty acids protein. (290 aa)
	F6SPL5_CIOIN	Elongation of very long chain fatty acids protein. (173 aa)
	LOC100181774	Cytochrome b5 heme-binding domain-containing protein. (432 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6SPL5_CIOIN	LOC100182900	ENSCINP00000022049	ENSCINP00000028199	Elongation of very long chain fatty acids protein.	Elongation of very long chain fatty acids protein.	0.902
LOC100176701	LOC100181774	ENSCINP00000007344	ENSCINP00000019998	Elongation of very long chain fatty acids protein.	Cytochrome b5 heme-binding domain-containing protein.	0.534
LOC100181774	LOC100176701	ENSCINP00000019998	ENSCINP00000007344	Cytochrome b5 heme-binding domain-containing protein.	Elongation of very long chain fatty acids protein.	0.534
LOC100182900	F6SPL5_CIOIN	ENSCINP00000028199	ENSCINP00000022049	Elongation of very long chain fatty acids protein.	Elongation of very long chain fatty acids protein.	0.902