STRINGSTRING
LOC100180323 LOC100180323 F6Q753_CIOIN F6Q753_CIOIN LOC100184966 LOC100184966 F6WB99_CIOIN F6WB99_CIOIN F6Z457_CIOIN F6Z457_CIOIN LOC100182407 LOC100182407 F6YDH8_CIOIN F6YDH8_CIOIN F7A6B8_CIOIN F7A6B8_CIOIN F6YTA1_CIOIN F6YTA1_CIOIN F6U6V9_CIOIN F6U6V9_CIOIN F6ZKW1_CIOIN F6ZKW1_CIOIN LOC100179163 LOC100179163 LOC100177778 LOC100177778 LOC100182924 LOC100182924 LOC100181332 LOC100181332 LOC100183843 LOC100183843 F6T2X1_CIOIN F6T2X1_CIOIN F6ZE98_CIOIN F6ZE98_CIOIN LOC100184010 LOC100184010 F6QR00_CIOIN F6QR00_CIOIN LOC100186210 LOC100186210 L7N0T0_CIOIN L7N0T0_CIOIN F6THX7_CIOIN F6THX7_CIOIN F6YK55_CIOIN F6YK55_CIOIN LOC100177272 LOC100177272 F6W2K7_CIOIN F6W2K7_CIOIN F6XSF3_CIOIN F6XSF3_CIOIN F6TRN8_CIOIN F6TRN8_CIOIN LOC100175483 LOC100175483 F6ZF56_CIOIN F6ZF56_CIOIN LOC100177747 LOC100177747 F6U8I2_CIOIN F6U8I2_CIOIN F7AWZ4_CIOIN F7AWZ4_CIOIN F6WUB5_CIOIN F6WUB5_CIOIN F6W7V1_CIOIN F6W7V1_CIOIN zf(rbz)-2 zf(rbz)-2 F6Y5Q3_CIOIN F6Y5Q3_CIOIN F7AF81_CIOIN F7AF81_CIOIN F7AF74_CIOIN F7AF74_CIOIN F6UXU4_CIOIN F6UXU4_CIOIN LOC100178283 LOC100178283 F6XIG6_CIOIN F6XIG6_CIOIN F6TBC4_CIOIN F6TBC4_CIOIN LOC100184979 LOC100184979 F6UIJ8_CIOIN F6UIJ8_CIOIN F6UII6_CIOIN F6UII6_CIOIN F6UIH8_CIOIN F6UIH8_CIOIN F6XEJ6_CIOIN F6XEJ6_CIOIN F6QQ49_CIOIN F6QQ49_CIOIN F6SRE5_CIOIN F6SRE5_CIOIN F6XAS1_CIOIN F6XAS1_CIOIN F6ZIK8_CIOIN F6ZIK8_CIOIN F6Z850_CIOIN F6Z850_CIOIN F6PNC3_CIOIN F6PNC3_CIOIN F6ZYP8_CIOIN F6ZYP8_CIOIN H2XJG6_CIOIN H2XJG6_CIOIN LOC100181341 LOC100181341 H2XM12_CIOIN H2XM12_CIOIN H2XM76_CIOIN H2XM76_CIOIN H2XPX0_CIOIN H2XPX0_CIOIN H2XQ25_CIOIN H2XQ25_CIOIN H2XRV2_CIOIN H2XRV2_CIOIN H2XRW2_CIOIN H2XRW2_CIOIN H2XSX1_CIOIN H2XSX1_CIOIN H2XTF8_CIOIN H2XTF8_CIOIN LOC101242260 LOC101242260 H2XU69_CIOIN H2XU69_CIOIN H2XU95_CIOIN H2XU95_CIOIN H2XVJ2_CIOIN H2XVJ2_CIOIN H2XWF9_CIOIN H2XWF9_CIOIN H2XYB4_CIOIN H2XYB4_CIOIN H2XZ54_CIOIN H2XZ54_CIOIN H2Y0I3_CIOIN H2Y0I3_CIOIN H2Y203_CIOIN H2Y203_CIOIN H2Y258_CIOIN H2Y258_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100180323G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor 2 family. (317 aa)
F6Q753_CIOINUncharacterized protein. (486 aa)
LOC100184966Histone H2B-like; Belongs to the histone H2B family. (121 aa)
F6WB99_CIOINUncharacterized protein. (401 aa)
F6Z457_CIOINUncharacterized protein. (447 aa)
LOC100182407Protein SEC13 homolog; Belongs to the WD repeat SEC13 family. (312 aa)
F6YDH8_CIOINRanBD1 domain-containing protein. (446 aa)
F7A6B8_CIOINUncharacterized protein. (523 aa)
F6YTA1_CIOINUncharacterized protein. (830 aa)
F6U6V9_CIOINUncharacterized protein. (388 aa)
F6ZKW1_CIOINGTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (161 aa)
LOC100179163WD_REPEATS_REGION domain-containing protein. (331 aa)
LOC100177778DNA-directed RNA polymerase II subunit RPB7. (172 aa)
LOC100182924Nucleoporin p58/p45. (478 aa)
LOC100181332Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (814 aa)
LOC100183843Histone H2A; Belongs to the histone H2A family. (128 aa)
F6T2X1_CIOINUncharacterized protein; Belongs to the WD repeat SEC13 family. (367 aa)
F6ZE98_CIOINUncharacterized protein. (300 aa)
LOC100184010mRNA export factor. (361 aa)
F6QR00_CIOINDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1183 aa)
LOC100186210Nucleoporin NDC1. (646 aa)
L7N0T0_CIOINRanBD1 domain-containing protein. (120 aa)
F6THX7_CIOINNsp1_C domain-containing protein. (511 aa)
F6YK55_CIOINUncharacterized protein; Belongs to the argonaute family. (862 aa)
LOC100177272DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1814 aa)
F6W2K7_CIOINUncharacterized protein. (222 aa)
F6XSF3_CIOINUncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1872 aa)
F6TRN8_CIOINUncharacterized protein. (1235 aa)
LOC100175483Importin N-terminal domain-containing protein. (1067 aa)
F6ZF56_CIOINUncharacterized protein. (521 aa)
LOC100177747Nuclear pore protein. (828 aa)
F6U8I2_CIOINNuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (236 aa)
F7AWZ4_CIOINC3H1-type domain-containing protein. (321 aa)
F6WUB5_CIOINNucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (321 aa)
F6W7V1_CIOINPiwi domain-containing protein. (105 aa)
zf(rbz)-2Uncharacterized protein. (1304 aa)
F6Y5Q3_CIOINRPOLD domain-containing protein. (151 aa)
F7AF81_CIOINUncharacterized protein. (1037 aa)
F7AF74_CIOINUncharacterized protein. (247 aa)
F6UXU4_CIOINUncharacterized protein. (217 aa)
LOC100178283DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (152 aa)
F6XIG6_CIOINRPOL4c domain-containing protein. (133 aa)
F6TBC4_CIOINUncharacterized protein. (347 aa)
LOC100184979Nucleoporin Nup37. (329 aa)
F6UIJ8_CIOINTudor domain-containing protein. (241 aa)
F6UII6_CIOINHelicase C-terminal domain-containing protein. (205 aa)
F6UIH8_CIOINTudor domain-containing protein. (240 aa)
F6XEJ6_CIOINUncharacterized protein. (218 aa)
F6QQ49_CIOINUncharacterized protein. (1164 aa)
F6SRE5_CIOINUncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (220 aa)
F6XAS1_CIOINUncharacterized protein. (502 aa)
F6ZIK8_CIOINUncharacterized protein. (184 aa)
F6Z850_CIOINUncharacterized protein. (55 aa)
F6PNC3_CIOINUncharacterized protein. (1086 aa)
F6ZYP8_CIOINUncharacterized protein. (374 aa)
H2XJG6_CIOINUncharacterized protein. (211 aa)
LOC100181341DNA-directed RNA polymerase II subunit RPB11-a isoform X1. (117 aa)
H2XM12_CIOINNuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (236 aa)
H2XM76_CIOINUncharacterized protein. (1422 aa)
H2XPX0_CIOINUncharacterized protein; Belongs to the argonaute family. (845 aa)
H2XQ25_CIOINUncharacterized protein. (1154 aa)
H2XRV2_CIOINUncharacterized protein. (218 aa)
H2XRW2_CIOINRRM domain-containing protein. (341 aa)
H2XSX1_CIOINUncharacterized protein. (240 aa)
H2XTF8_CIOINUncharacterized protein. (231 aa)
LOC101242260DNA-directed RNA polymerases I, II, and III subunit RPABC4. (79 aa)
H2XU69_CIOINUncharacterized protein. (1220 aa)
H2XU95_CIOINUncharacterized protein. (237 aa)
H2XVJ2_CIOINUncharacterized protein. (141 aa)
H2XWF9_CIOINUncharacterized protein. (488 aa)
H2XYB4_CIOINNucleoporin_C domain-containing protein. (1164 aa)
H2XZ54_CIOINRPOLD domain-containing protein. (286 aa)
H2Y0I3_CIOING_PROTEIN_RECEP_F2_4 domain-containing protein. (153 aa)
H2Y203_CIOINUncharacterized protein. (152 aa)
H2Y258_CIOINWW domain-containing protein. (243 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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