STRINGSTRING
F7BBT3_CIOIN F7BBT3_CIOIN F6ZZH3_CIOIN F6ZZH3_CIOIN F6SF30_CIOIN F6SF30_CIOIN F7BL59_CIOIN F7BL59_CIOIN LOC100181643 LOC100181643 F6XMT9_CIOIN F6XMT9_CIOIN F6XMP8_CIOIN F6XMP8_CIOIN LOC100177596 LOC100177596 cnot7/8 cnot7/8 F6XGT9_CIOIN F6XGT9_CIOIN F7A4T6_CIOIN F7A4T6_CIOIN F7B4V3_CIOIN F7B4V3_CIOIN LOC100183089 LOC100183089 F6UGN5_CIOIN F6UGN5_CIOIN F6S5I8_CIOIN F6S5I8_CIOIN F6WQE3_CIOIN F6WQE3_CIOIN LOC100184256 LOC100184256 F7BD94_CIOIN F7BD94_CIOIN LOC100177468 LOC100177468 F6U4L6_CIOIN F6U4L6_CIOIN ENSCINP00000011586 ENSCINP00000011586 LOC100186999 LOC100186999 F6UNS0_CIOIN F6UNS0_CIOIN LOC100187049 LOC100187049 LOC100177846 LOC100177846 F6RZE8_CIOIN F6RZE8_CIOIN F7B898_CIOIN F7B898_CIOIN F6XF93_CIOIN F6XF93_CIOIN F6W2C6_CIOIN F6W2C6_CIOIN F7BBD1_CIOIN F7BBD1_CIOIN F6TKH9_CIOIN F6TKH9_CIOIN LOC104265690 LOC104265690 LOC100176328-2 LOC100176328-2 F6PI67_CIOIN F6PI67_CIOIN F6U981_CIOIN F6U981_CIOIN LOC100184512 LOC100184512 F6V2B2_CIOIN F6V2B2_CIOIN LSM1 LSM1 F6WP26_CIOIN F6WP26_CIOIN LOC100182394 LOC100182394 F6SEU1_CIOIN F6SEU1_CIOIN H2XJM9_CIOIN H2XJM9_CIOIN LOC100187471 LOC100187471 H2XPH6_CIOIN H2XPH6_CIOIN LOC100182087 LOC100182087 LOC100181225 LOC100181225 H2XSE6_CIOIN H2XSE6_CIOIN H2XSZ1_CIOIN H2XSZ1_CIOIN H2XU65_CIOIN H2XU65_CIOIN H2XUI3_CIOIN H2XUI3_CIOIN H2XVM3_CIOIN H2XVM3_CIOIN H2XVU2_CIOIN H2XVU2_CIOIN H2XWR8_CIOIN H2XWR8_CIOIN LOC100180305 LOC100180305 LOC100180713 LOC100180713 H2Y2H8_CIOIN H2Y2H8_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F7BBT3_CIOINTr-type G domain-containing protein. (711 aa)
F6ZZH3_CIOINUncharacterized protein. (692 aa)
F6SF30_CIOINUncharacterized protein. (750 aa)
F7BL59_CIOINExonuclease domain-containing protein. (241 aa)
LOC100181643poly(A) RNA polymerase gld-2 isoform X1. (713 aa)
F6XMT9_CIOINUncharacterized protein. (261 aa)
F6XMP8_CIOINUncharacterized protein. (501 aa)
LOC100177596Eukaryotic initiation factor 4A-I; Belongs to the DEAD box helicase family. (430 aa)
cnot7/8Ci-CNOT7/8 protein. (278 aa)
F6XGT9_CIOINC3H1-type domain-containing protein. (450 aa)
F7A4T6_CIOINRNB domain-containing protein. (741 aa)
F7B4V3_CIOINUncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (225 aa)
LOC100183089Exosome complex component RRP43. (279 aa)
F6UGN5_CIOINUncharacterized protein. (296 aa)
F6S5I8_CIOINUncharacterized protein. (654 aa)
F6WQE3_CIOINUncharacterized protein. (310 aa)
LOC100184256Exosome complex component RRP42-like. (290 aa)
F7BD94_CIOINGe1_WD40 domain-containing protein. (1352 aa)
LOC100177468UPF0692 protein C19orf54 homolog. (286 aa)
F6U4L6_CIOINUncharacterized protein. (1158 aa)
ENSCINP00000011586Uncharacterized protein. (235 aa)
LOC100186999Uncharacterized protein. (368 aa)
F6UNS0_CIOINNOT2_3_5 domain-containing protein. (132 aa)
LOC100187049Endo/exonuclease/phosphatase domain-containing protein. (563 aa)
LOC100177846Leucine-rich repeat-containing protein 27 isoform X1. (486 aa)
F6RZE8_CIOINRRM domain-containing protein. (329 aa)
F7B898_CIOINUncharacterized protein; Belongs to the DEAD box helicase family. (435 aa)
F6XF93_CIOINUncharacterized protein. (410 aa)
F6W2C6_CIOINUncharacterized protein. (1416 aa)
F7BBD1_CIOINUncharacterized protein. (2317 aa)
F6TKH9_CIOINRNase_PH domain-containing protein. (247 aa)
LOC104265690Terminal uridylyltransferase 7-like. (402 aa)
LOC100176328-2Uncharacterized protein LOC100176328 isoform X2. (263 aa)
F6PI67_CIOINR3H domain-containing protein. (527 aa)
F6U981_CIOINUncharacterized protein. (374 aa)
LOC100184512U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (127 aa)
F6V2B2_CIOINRNase_PH domain-containing protein. (280 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (132 aa)
F6WP26_CIOINUncharacterized protein. (292 aa)
LOC100182394Exosome complex component RRP4. (302 aa)
F6SEU1_CIOINPan3_PK domain-containing protein. (387 aa)
H2XJM9_CIOINUncharacterized protein. (96 aa)
LOC100187471Uncharacterized protein; Belongs to the RNR ribonuclease family. (916 aa)
H2XPH6_CIOINUncharacterized protein. (504 aa)
LOC100182087WD repeat-containing protein 61-like. (305 aa)
LOC100181225U6 snRNA-associated Sm-like protein LSm6. (82 aa)
H2XSE6_CIOINPAT1 domain-containing protein. (580 aa)
H2XSZ1_CIOINU6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
H2XU65_CIOINKH_dom_type_1 domain-containing protein. (241 aa)
H2XUI3_CIOINUncharacterized protein. (208 aa)
H2XVM3_CIOINUncharacterized protein. (1278 aa)
H2XVU2_CIOINUncharacterized protein. (130 aa)
H2XWR8_CIOINNudix hydrolase domain-containing protein. (235 aa)
LOC100180305U6 snRNA-associated Sm-like protein LSm7. (99 aa)
LOC100180713U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (89 aa)
H2Y2H8_CIOINUncharacterized protein. (258 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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