31 items (Ciona intestinalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100180123	RING-CH-type domain-containing protein. (225 aa)
	LOC494394	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (577 aa)
	LOC100175549	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (533 aa)
	LOC100181653	PAW domain-containing protein. (635 aa)
	LOC113474176	kxDL motif-containing protein 1-like. (139 aa)
	LOC100183554	Uncharacterized protein. (1561 aa)
	F6VJQ1_CIOIN	Uncharacterized protein. (347 aa)
	LOC100176866	E3 ubiquitin-protein ligase MARCH4-like. (211 aa)
	F6ZH48_CIOIN	RING-type domain-containing protein. (285 aa)
	LOC100179038	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (752 aa)
	F6Z781_CIOIN	Calreticulin. (425 aa)
	F6ZJN8_CIOIN	Uncharacterized protein. (381 aa)
	F7ANZ8_CIOIN	Uncharacterized protein. (293 aa)
	LOC100175070	Probable E3 ubiquitin-protein ligase MARCH10. (234 aa)
	LOC100187157	Uncharacterized protein; Belongs to the AAA ATPase family. (811 aa)
	LOC100180827	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (400 aa)
	LOC100176980	Uncharacterized protein LOC100176980 isoform X1. (566 aa)
	LOC100184179	Protein disulfide-isomerase. (630 aa)
	r27a	R27a protein isoform X1. (155 aa)
	F6YHD5_CIOIN	AAA domain-containing protein; Belongs to the AAA ATPase family. (225 aa)
	F6YHT4_CIOIN	AAA domain-containing protein; Belongs to the AAA ATPase family. (463 aa)
	LOC100184259	E3 ubiquitin-protein ligase MARCH6. (887 aa)
	LOC100185384	ubiquitin-60S ribosomal protein L40. (128 aa)
	F6ZQI8_CIOIN	Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family. (384 aa)
	LOC100175110	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (254 aa)
	LOC100183132	Uncharacterized protein. (740 aa)
	LOC100182082	AAA domain-containing protein; Belongs to the AAA ATPase family. (463 aa)
	F6WYW5_CIOIN	Protein disulfide-isomerase. (488 aa)
	F7AJ84_CIOIN	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family. (932 aa)
	F7B397_CIOIN	Uncharacterized protein. (275 aa)
	F6ZBA8_CIOIN	Glyco_hydro_63 domain-containing protein. (466 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6VJQ1_CIOIN	F6YHD5_CIOIN	ENSCINP00000026820	ENSCINP00000010765	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.673
F6VJQ1_CIOIN	F6YHT4_CIOIN	ENSCINP00000026820	ENSCINP00000010750	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.673
F6VJQ1_CIOIN	F6ZH48_CIOIN	ENSCINP00000026820	ENSCINP00000024214	Uncharacterized protein.	RING-type domain-containing protein.	0.457
F6VJQ1_CIOIN	F7ANZ8_CIOIN	ENSCINP00000026820	ENSCINP00000015289	Uncharacterized protein.	Uncharacterized protein.	0.616
F6VJQ1_CIOIN	LOC100175110	ENSCINP00000026820	ENSCINP00000009346	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.505
F6VJQ1_CIOIN	LOC100181653	ENSCINP00000026820	ENSCINP00000034572	Uncharacterized protein.	PAW domain-containing protein.	0.680
F6VJQ1_CIOIN	LOC100182082	ENSCINP00000026820	ENSCINP00000007307	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.854
F6VJQ1_CIOIN	LOC100185384	ENSCINP00000026820	ENSCINP00000010307	Uncharacterized protein.	ubiquitin-60S ribosomal protein L40.	0.923
F6VJQ1_CIOIN	LOC100187157	ENSCINP00000026820	ENSCINP00000014598	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.673
F6VJQ1_CIOIN	LOC113474176	ENSCINP00000026820	ENSCINP00000031397	Uncharacterized protein.	kxDL motif-containing protein 1-like.	0.461
F6VJQ1_CIOIN	r27a	ENSCINP00000026820	ENSCINP00000012037	Uncharacterized protein.	R27a protein isoform X1.	0.883
F6WYW5_CIOIN	F6Z781_CIOIN	ENSCINP00000005773	ENSCINP00000016510	Protein disulfide-isomerase.	Calreticulin.	0.867
F6WYW5_CIOIN	F7AJ84_CIOIN	ENSCINP00000005773	ENSCINP00000005372	Protein disulfide-isomerase.	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	0.432
F6WYW5_CIOIN	F7B397_CIOIN	ENSCINP00000005773	ENSCINP00000005300	Protein disulfide-isomerase.	Uncharacterized protein.	0.715
F6YHD5_CIOIN	F6VJQ1_CIOIN	ENSCINP00000010765	ENSCINP00000026820	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.673
F6YHD5_CIOIN	F6ZH48_CIOIN	ENSCINP00000010765	ENSCINP00000024214	AAA domain-containing protein; Belongs to the AAA ATPase family.	RING-type domain-containing protein.	0.681
F6YHD5_CIOIN	F6ZJN8_CIOIN	ENSCINP00000010765	ENSCINP00000015598	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.673
F6YHD5_CIOIN	F7ANZ8_CIOIN	ENSCINP00000010765	ENSCINP00000015289	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.835
F6YHD5_CIOIN	F7B397_CIOIN	ENSCINP00000010765	ENSCINP00000005300	AAA domain-containing protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.454
F6YHD5_CIOIN	LOC100175110	ENSCINP00000010765	ENSCINP00000009346	AAA domain-containing protein; Belongs to the AAA ATPase family.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.876