STRINGSTRING
LOC100185957 LOC100185957 LOC100186374 LOC100186374 F6Z3V6_CIOIN F6Z3V6_CIOIN LOC100181511 LOC100181511 F6PP61_CIOIN F6PP61_CIOIN F6S376_CIOIN F6S376_CIOIN F6XKP0_CIOIN F6XKP0_CIOIN F7BHP4_CIOIN F7BHP4_CIOIN LOC100182082 LOC100182082 LOC100184190 LOC100184190 LOC100184510 LOC100184510 F7A955_CIOIN F7A955_CIOIN H2Y3S9_CIOIN H2Y3S9_CIOIN LOC100185384 LOC100185384 F6Z1D9_CIOIN F6Z1D9_CIOIN LOC100183036 LOC100183036 F6YHS8_CIOIN F6YHS8_CIOIN F6RUQ3_CIOIN F6RUQ3_CIOIN Tak1/mapkkk7 Tak1/mapkkk7 LOC100185096 LOC100185096 r27a r27a F7BLS5_CIOIN F7BLS5_CIOIN LOC100183602 LOC100183602 LOC100183552 LOC100183552 F6QS20_CIOIN F6QS20_CIOIN F6PW28_CIOIN F6PW28_CIOIN LOC100187507 LOC100187507 LOC100184104 LOC100184104 nfkbp105 nfkbp105 F6ZJN8_CIOIN F6ZJN8_CIOIN LOC100177476 LOC100177476 LOC100182845 LOC100182845 LOC100176760 LOC100176760 LOC100178755 LOC100178755 LOC100186602 LOC100186602 betaTrCP betaTrCP F6Z491_CIOIN F6Z491_CIOIN LOC100187162 LOC100187162 LOC113474124 LOC113474124 F6Y940_CIOIN F6Y940_CIOIN Q4H3C1_CIOIN Q4H3C1_CIOIN F6TER2_CIOIN F6TER2_CIOIN F6SDU1_CIOIN F6SDU1_CIOIN F6V0W8_CIOIN F6V0W8_CIOIN F6VM15_CIOIN F6VM15_CIOIN F6VJQ1_CIOIN F6VJQ1_CIOIN LOC100179989 LOC100179989 H2XJH2_CIOIN H2XJH2_CIOIN H2XLA2_CIOIN H2XLA2_CIOIN LOC100179683 LOC100179683 Q1RPY5_CIOIN Q1RPY5_CIOIN LOC113474176 LOC113474176 H2XSU1_CIOIN H2XSU1_CIOIN LOC100179585 LOC100179585 H2XV34_CIOIN H2XV34_CIOIN zeta zeta H2XYW0_CIOIN H2XYW0_CIOIN LOC100187330 LOC100187330 H2Y0N7_CIOIN H2Y0N7_CIOIN H2Y0S5_CIOIN H2Y0S5_CIOIN LOC100179460 LOC100179460 H2Y1I4_CIOIN H2Y1I4_CIOIN H2Y1T2_CIOIN H2Y1T2_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100185957Mucosa-associated lymphoid tissue lymphoma translocation protein 1-like isoform X1. (624 aa)
LOC10018637426S proteasome non-ATPase regulatory subunit 11. (420 aa)
F6Z3V6_CIOINUncharacterized protein. (1821 aa)
LOC100181511S-phase kinase-associated protein 1; Belongs to the SKP1 family. (162 aa)
F6PP61_CIOINProteasome subunit beta; Belongs to the peptidase T1B family. (260 aa)
F6S376_CIOINPA28_alpha domain-containing protein. (82 aa)
F6XKP0_CIOINAAA domain-containing protein; Belongs to the AAA ATPase family. (397 aa)
F7BHP4_CIOINAAA domain-containing protein; Belongs to the AAA ATPase family. (428 aa)
LOC100182082AAA domain-containing protein; Belongs to the AAA ATPase family. (463 aa)
LOC100184190AAA domain-containing protein; Belongs to the AAA ATPase family. (419 aa)
LOC100184510PCI domain-containing protein. (386 aa)
F7A955_CIOINProteasome subunit beta. (221 aa)
H2Y3S9_CIOINRPN2_C domain-containing protein. (79 aa)
LOC100185384ubiquitin-60S ribosomal protein L40. (128 aa)
F6Z1D9_CIOINPA28_beta domain-containing protein. (255 aa)
LOC100183036Proteasome subunit alpha type. (220 aa)
F6YHS8_CIOINPCI domain-containing protein. (458 aa)
F6RUQ3_CIOINProteasome subunit alpha type. (251 aa)
Tak1/mapkkk7Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (190 aa)
LOC10018509626S proteasome regulatory subunit 7; Belongs to the AAA ATPase family. (433 aa)
r27aR27a protein isoform X1. (155 aa)
F7BLS5_CIOINPCI domain-containing protein. (398 aa)
LOC100183602E2_bind domain-containing protein. (446 aa)
LOC100183552ANK_REP_REGION domain-containing protein. (230 aa)
F6QS20_CIOINVWFA domain-containing protein. (370 aa)
F6PW28_CIOINCULLIN_2 domain-containing protein; Belongs to the cullin family. (778 aa)
LOC100187507Uncharacterized protein. (510 aa)
LOC100184104PCI domain-containing protein. (376 aa)
nfkbp105Uncharacterized protein. (1202 aa)
F6ZJN8_CIOINUncharacterized protein. (381 aa)
LOC100177476Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (251 aa)
LOC100182845Proteasome subunit alpha type-4-like. (91 aa)
LOC100176760Proteasome subunit alpha type. (253 aa)
LOC100178755Transmembrane protein 189. (282 aa)
LOC100186602Proteasome subunit beta. (268 aa)
betaTrCPBeta-transducin repeat-containing HOMOLOGUE protein. (621 aa)
F6Z491_CIOINProteasome subunit alpha type. (242 aa)
LOC100187162AAA domain-containing protein; Belongs to the AAA ATPase family. (393 aa)
LOC113474124Proteasome subunit beta. (205 aa)
F6Y940_CIOINSerine/threonine-protein phosphatase. (241 aa)
Q4H3C1_CIOINIkappaB kinase. (172 aa)
F6TER2_CIOINProtein kinase domain-containing protein. (206 aa)
F6SDU1_CIOINPCI domain-containing protein. (270 aa)
F6V0W8_CIOINUncharacterized protein. (235 aa)
F6VM15_CIOINRanBP2-type domain-containing protein. (339 aa)
F6VJQ1_CIOINUncharacterized protein. (347 aa)
LOC100179989PPM-type phosphatase domain-containing protein. (490 aa)
H2XJH2_CIOINUncharacterized protein. (216 aa)
H2XLA2_CIOINUncharacterized protein. (206 aa)
LOC10017968326S proteasome non-ATPase regulatory subunit 14. (310 aa)
Q1RPY5_CIOINZinc finger protein. (579 aa)
LOC113474176kxDL motif-containing protein 1-like. (139 aa)
H2XSU1_CIOINProteasome subunit beta. (239 aa)
LOC100179585Proteasome subunit alpha type. (233 aa)
H2XV34_CIOINUncharacterized protein. (117 aa)
zetaProteasome subunit beta. (276 aa)
H2XYW0_CIOINMPN domain-containing protein. (323 aa)
LOC100187330Calcineurin subunit B type 1. (170 aa)
H2Y0N7_CIOINPkinase_Tyr domain-containing protein. (196 aa)
H2Y0S5_CIOINRHD_dimer domain-containing protein. (378 aa)
LOC100179460Proteasome subunit beta. (200 aa)
H2Y1I4_CIOINWD_REPEATS_REGION domain-containing protein. (356 aa)
H2Y1T2_CIOINWD_REPEATS_REGION domain-containing protein. (153 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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