STRINGSTRING
F7BLS5_CIOIN F7BLS5_CIOIN r27a r27a F6VVB7_CIOIN F6VVB7_CIOIN LOC100185096 LOC100185096 F6RUQ3_CIOIN F6RUQ3_CIOIN LOC100177816 LOC100177816 F6UIT3_CIOIN F6UIT3_CIOIN F6YH10_CIOIN F6YH10_CIOIN F6YHS8_CIOIN F6YHS8_CIOIN LOC100183036 LOC100183036 F6Z1D9_CIOIN F6Z1D9_CIOIN LOC100185384 LOC100185384 F6WMK2_CIOIN F6WMK2_CIOIN F6QND3_CIOIN F6QND3_CIOIN F7A955_CIOIN F7A955_CIOIN LOC100184510 LOC100184510 MCM7 MCM7 LOC100187071 LOC100187071 LOC100186064 LOC100186064 LOC100184190 LOC100184190 F6UXR3_CIOIN F6UXR3_CIOIN LOC100182082 LOC100182082 F7BHP4_CIOIN F7BHP4_CIOIN F6XKP0_CIOIN F6XKP0_CIOIN F7BA18_CIOIN F7BA18_CIOIN F6TBB0_CIOIN F6TBB0_CIOIN F6S376_CIOIN F6S376_CIOIN F6QIV0_CIOIN F6QIV0_CIOIN F6R4H7_CIOIN F6R4H7_CIOIN F6PP61_CIOIN F6PP61_CIOIN LOC100181511 LOC100181511 LOC100182084 LOC100182084 F6RZM2_CIOIN F6RZM2_CIOIN LOC108950147 LOC108950147 LOC100186374 LOC100186374 H2Y3S9_CIOIN H2Y3S9_CIOIN LOC100179460 LOC100179460 H2XYW0_CIOIN H2XYW0_CIOIN LOC100182514 LOC100182514 zeta zeta LOC100184078 LOC100184078 LOC100179585 LOC100179585 H2XT91_CIOIN H2XT91_CIOIN cbf-2 cbf-2 H2XSU1_CIOIN H2XSU1_CIOIN cdc45 cdc45 H2XRL5_CIOIN H2XRL5_CIOIN H2XPS2_CIOIN H2XPS2_CIOIN H2XP67_CIOIN H2XP67_CIOIN LOC113474176 LOC113474176 H2XNL8_CIOIN H2XNL8_CIOIN LOC100179683 LOC100179683 H2XLA2_CIOIN H2XLA2_CIOIN LOC113474468 LOC113474468 H2XJH2_CIOIN H2XJH2_CIOIN F6T368_CIOIN F6T368_CIOIN LOC100183603 LOC100183603 F6VJQ1_CIOIN F6VJQ1_CIOIN F7BHX3_CIOIN F7BHX3_CIOIN F6V0W8_CIOIN F6V0W8_CIOIN F6SDU1_CIOIN F6SDU1_CIOIN F6V6S0_CIOIN F6V6S0_CIOIN LOC100183401 LOC100183401 F7BPT5_CIOIN F7BPT5_CIOIN LOC100186458 LOC100186458 F6PI50_CIOIN F6PI50_CIOIN F6WUQ7_CIOIN F6WUQ7_CIOIN LOC113474124 LOC113474124 LOC100187162 LOC100187162 F6Z491_CIOIN F6Z491_CIOIN LOC100186602 LOC100186602 F6SCJ9_CIOIN F6SCJ9_CIOIN F6WBW9_CIOIN F6WBW9_CIOIN F6WCV2_CIOIN F6WCV2_CIOIN F6T283_CIOIN F6T283_CIOIN F6T453_CIOIN F6T453_CIOIN zf(ring)-55 zf(ring)-55 LOC100182845 LOC100182845 LOC100177208 LOC100177208 F6S4F7_CIOIN F6S4F7_CIOIN LOC100177476 LOC100177476 F6W685_CIOIN F6W685_CIOIN F6W6L5_CIOIN F6W6L5_CIOIN F6ZJN8_CIOIN F6ZJN8_CIOIN F6T957_CIOIN F6T957_CIOIN F6X7U3_CIOIN F6X7U3_CIOIN LOC100184902 LOC100184902 LOC100176589 LOC100176589 LOC100176054 LOC100176054 LOC100184104 LOC100184104 F6R0X3_CIOIN F6R0X3_CIOIN LOC100187507 LOC100187507 F6PW28_CIOIN F6PW28_CIOIN F6QS20_CIOIN F6QS20_CIOIN F6RKM9_CIOIN F6RKM9_CIOIN LOC100183552 LOC100183552
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F7BLS5_CIOINPCI domain-containing protein. (398 aa)
r27aR27a protein isoform X1. (155 aa)
F6VVB7_CIOINCyclin N-terminal domain-containing protein; Belongs to the cyclin family. (315 aa)
LOC10018509626S proteasome regulatory subunit 7; Belongs to the AAA ATPase family. (433 aa)
F6RUQ3_CIOINProteasome subunit alpha type. (251 aa)
LOC100177816cyclin-H; Belongs to the cyclin family. (329 aa)
F6UIT3_CIOINUncharacterized protein. (162 aa)
F6YH10_CIOINDNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (466 aa)
F6YHS8_CIOINPCI domain-containing protein. (458 aa)
LOC100183036Proteasome subunit alpha type. (220 aa)
F6Z1D9_CIOINPA28_beta domain-containing protein. (255 aa)
LOC100185384ubiquitin-60S ribosomal protein L40. (128 aa)
F6WMK2_CIOINMCM domain-containing protein; Belongs to the MCM family. (817 aa)
F6QND3_CIOINMcm10 domain-containing protein. (755 aa)
F7A955_CIOINProteasome subunit beta. (221 aa)
LOC100184510PCI domain-containing protein. (386 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (726 aa)
LOC100187071Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (187 aa)
LOC100186064Serine/threonine-protein phosphatase. (314 aa)
LOC100184190AAA domain-containing protein; Belongs to the AAA ATPase family. (419 aa)
F6UXR3_CIOIN26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. (901 aa)
LOC100182082AAA domain-containing protein; Belongs to the AAA ATPase family. (463 aa)
F7BHP4_CIOINAAA domain-containing protein; Belongs to the AAA ATPase family. (428 aa)
F6XKP0_CIOINAAA domain-containing protein; Belongs to the AAA ATPase family. (397 aa)
F7BA18_CIOINDNA helicase; Belongs to the MCM family. (740 aa)
F6TBB0_CIOINAAA_16 domain-containing protein. (432 aa)
F6S376_CIOINPA28_alpha domain-containing protein. (82 aa)
F6QIV0_CIOINDNA_pol_E_B domain-containing protein. (328 aa)
F6R4H7_CIOINUncharacterized protein. (315 aa)
F6PP61_CIOINProteasome subunit beta; Belongs to the peptidase T1B family. (260 aa)
LOC100181511S-phase kinase-associated protein 1; Belongs to the SKP1 family. (162 aa)
LOC100182084Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (461 aa)
F6RZM2_CIOINDNA polymerase. (382 aa)
LOC108950147DNA helicase; Belongs to the MCM family. (798 aa)
LOC10018637426S proteasome non-ATPase regulatory subunit 11. (420 aa)
H2Y3S9_CIOINRPN2_C domain-containing protein. (79 aa)
LOC100179460Proteasome subunit beta. (200 aa)
H2XYW0_CIOINMPN domain-containing protein. (323 aa)
LOC100182514Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (607 aa)
zetaProteasome subunit beta. (276 aa)
LOC100184078CDT1 domain-containing protein. (407 aa)
LOC100179585Proteasome subunit alpha type. (233 aa)
H2XT91_CIOINCyclin N-terminal domain-containing protein. (100 aa)
cbf-2Transcription factor CBF/NF-Y/archaeal histone -2. (156 aa)
H2XSU1_CIOINProteasome subunit beta. (239 aa)
cdc45Uncharacterized protein. (249 aa)
H2XRL5_CIOINzf-DNA_Pol domain-containing protein. (143 aa)
H2XPS2_CIOINUncharacterized protein. (232 aa)
H2XP67_CIOINUncharacterized protein. (64 aa)
LOC113474176kxDL motif-containing protein 1-like. (139 aa)
H2XNL8_CIOINOrigin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (419 aa)
LOC10017968326S proteasome non-ATPase regulatory subunit 14. (310 aa)
H2XLA2_CIOINUncharacterized protein. (206 aa)
LOC113474468Replication protein A 14 kDa subunit-like. (118 aa)
H2XJH2_CIOINUncharacterized protein. (216 aa)
F6T368_CIOINDNA_pol_B_exo1 domain-containing protein. (276 aa)
LOC100183603Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (81 aa)
F6VJQ1_CIOINUncharacterized protein. (347 aa)
F7BHX3_CIOINUncharacterized protein. (283 aa)
F6V0W8_CIOINUncharacterized protein. (235 aa)
F6SDU1_CIOINPCI domain-containing protein. (270 aa)
F6V6S0_CIOINUncharacterized protein. (714 aa)
LOC100183401Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. (426 aa)
F7BPT5_CIOINCBFD_NFYB_HMF domain-containing protein. (75 aa)
LOC100186458Protein kinase domain-containing protein. (743 aa)
F6PI50_CIOINUncharacterized protein. (175 aa)
F6WUQ7_CIOINDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2157 aa)
LOC113474124Proteasome subunit beta. (205 aa)
LOC100187162AAA domain-containing protein; Belongs to the AAA ATPase family. (393 aa)
F6Z491_CIOINProteasome subunit alpha type. (242 aa)
LOC100186602Proteasome subunit beta. (268 aa)
F6SCJ9_CIOINUncharacterized protein. (497 aa)
F6WBW9_CIOINDNA_pol_E_B domain-containing protein. (165 aa)
F6WCV2_CIOINProtein kinase domain-containing protein. (510 aa)
F6T283_CIOINUncharacterized protein. (454 aa)
F6T453_CIOINUncharacterized protein; Belongs to the cyclin family. (430 aa)
zf(ring)-55Zinc finger protein. (323 aa)
LOC100182845Proteasome subunit alpha type-4-like. (91 aa)
LOC100177208S-phase kinase-associated protein 2. (453 aa)
F6S4F7_CIOINNon-specific serine/threonine protein kinase. (512 aa)
LOC100177476Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (251 aa)
F6W685_CIOINUncharacterized protein. (428 aa)
F6W6L5_CIOINMCM domain-containing protein; Belongs to the MCM family. (422 aa)
F6ZJN8_CIOINUncharacterized protein. (381 aa)
F6T957_CIOINUncharacterized protein. (589 aa)
F6X7U3_CIOINLisH domain-containing protein. (1112 aa)
LOC100184902Geminin. (257 aa)
LOC100176589DNA helicase; Belongs to the MCM family. (785 aa)
LOC100176054DNA primase; Belongs to the eukaryotic-type primase small subunit family. (436 aa)
LOC100184104PCI domain-containing protein. (376 aa)
F6R0X3_CIOINEF-hand domain-containing protein. (182 aa)
LOC100187507Uncharacterized protein. (510 aa)
F6PW28_CIOINCULLIN_2 domain-containing protein; Belongs to the cullin family. (778 aa)
F6QS20_CIOINVWFA domain-containing protein. (370 aa)
F6RKM9_CIOINDNA helicase; Belongs to the MCM family. (820 aa)
LOC100183552ANK_REP_REGION domain-containing protein. (230 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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