(26 nodes) Gluconeogenesis network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100186457	Glyceraldehyde-3-phosphate dehydrogenase. (334 aa)
	LOC100186682	Mitochondrial dicarboxylate carrier-like; Belongs to the mitochondrial carrier (TC 2.A.29) family. (288 aa)
	F6VGB1_CIOIN	Uncharacterized protein; Belongs to the LDH/MDH superfamily. (359 aa)
	LOC100176157	Tricarboxylate transport protein, mitochondrial-like; Belongs to the mitochondrial carrier (TC 2.A.29) family. (344 aa)
	F6V8G3_CIOIN	Enolase_C domain-containing protein. (577 aa)
	F6W097_CIOIN	MFS domain-containing protein. (491 aa)
	F7AZD3_CIOIN	Glucose-6-phosphate isomerase; Belongs to the GPI family. (232 aa)
	LOC100178529	Malate dehydrogenase, mitochondrial-like; Belongs to the LDH/MDH superfamily. (345 aa)
	F6XRP8_CIOIN	MFS domain-containing protein. (445 aa)
	LOC100184965	Aspartate aminotransferase. (415 aa)
	LOC100178673	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (364 aa)
	F6X3X4_CIOIN	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (304 aa)
	F6VWV8_CIOIN	MFS domain-containing protein. (488 aa)
	LOC100181512	Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1186 aa)
	LOC100177203	Alpha-enolase-like. (440 aa)
	F7BK34_CIOIN	Uncharacterized protein. (252 aa)
	F7BK40_CIOIN	Uncharacterized protein. (135 aa)
	LOC100177066	Uncharacterized protein. (641 aa)
	F6RLW1_CIOIN	Uncharacterized protein. (146 aa)
	LOC100179315	Aspartate aminotransferase. (425 aa)
	F6WN68_CIOIN	Uncharacterized protein. (1052 aa)
	LOC100183627	MYCBP-associated protein-like isoform X2. (861 aa)
	LOC100182231	Phosphoglycerate kinase. (416 aa)
	F6X4B8_CIOIN	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (600 aa)
	LOC100183090	Triosephosphate isomerase. (247 aa)
	H2Y3K9_CIOIN	Malate dehydrogenase. (334 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6RLW1_CIOIN	F6V8G3_CIOIN	ENSCINP00000011954	ENSCINP00000022815	Uncharacterized protein.	Enolase_C domain-containing protein.	0.567
F6RLW1_CIOIN	F7AZD3_CIOIN	ENSCINP00000011954	ENSCINP00000019213	Uncharacterized protein.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.802
F6RLW1_CIOIN	LOC100177066	ENSCINP00000011954	ENSCINP00000012511	Uncharacterized protein.	Uncharacterized protein.	0.414
F6RLW1_CIOIN	LOC100177203	ENSCINP00000011954	ENSCINP00000015064	Uncharacterized protein.	Alpha-enolase-like.	0.588
F6RLW1_CIOIN	LOC100178529	ENSCINP00000011954	ENSCINP00000017905	Uncharacterized protein.	Malate dehydrogenase, mitochondrial-like; Belongs to the LDH/MDH superfamily.	0.433
F6RLW1_CIOIN	LOC100182231	ENSCINP00000011954	ENSCINP00000004580	Uncharacterized protein.	Phosphoglycerate kinase.	0.732
F6RLW1_CIOIN	LOC100183090	ENSCINP00000011954	ENSCINP00000013486	Uncharacterized protein.	Triosephosphate isomerase.	0.869
F6RLW1_CIOIN	LOC100183627	ENSCINP00000011954	ENSCINP00000005918	Uncharacterized protein.	MYCBP-associated protein-like isoform X2.	0.674
F6RLW1_CIOIN	LOC100186457	ENSCINP00000011954	ENSCINP00000034531	Uncharacterized protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.903
F6V8G3_CIOIN	F6RLW1_CIOIN	ENSCINP00000022815	ENSCINP00000011954	Enolase_C domain-containing protein.	Uncharacterized protein.	0.567
F6V8G3_CIOIN	F6VGB1_CIOIN	ENSCINP00000022815	ENSCINP00000028601	Enolase_C domain-containing protein.	Uncharacterized protein; Belongs to the LDH/MDH superfamily.	0.540
F6V8G3_CIOIN	F7AZD3_CIOIN	ENSCINP00000022815	ENSCINP00000019213	Enolase_C domain-containing protein.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.983
F6V8G3_CIOIN	H2Y3K9_CIOIN	ENSCINP00000022815	ENSCINP00000036494	Enolase_C domain-containing protein.	Malate dehydrogenase.	0.540
F6V8G3_CIOIN	LOC100177066	ENSCINP00000022815	ENSCINP00000012511	Enolase_C domain-containing protein.	Uncharacterized protein.	0.976
F6V8G3_CIOIN	LOC100177203	ENSCINP00000022815	ENSCINP00000015064	Enolase_C domain-containing protein.	Alpha-enolase-like.	0.929
F6V8G3_CIOIN	LOC100178529	ENSCINP00000022815	ENSCINP00000017905	Enolase_C domain-containing protein.	Malate dehydrogenase, mitochondrial-like; Belongs to the LDH/MDH superfamily.	0.635
F6V8G3_CIOIN	LOC100178673	ENSCINP00000022815	ENSCINP00000016703	Enolase_C domain-containing protein.	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	0.909
F6V8G3_CIOIN	LOC100179315	ENSCINP00000022815	ENSCINP00000007609	Enolase_C domain-containing protein.	Aspartate aminotransferase.	0.512
F6V8G3_CIOIN	LOC100181512	ENSCINP00000022815	ENSCINP00000015426	Enolase_C domain-containing protein.	Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.	0.493
F6V8G3_CIOIN	LOC100182231	ENSCINP00000022815	ENSCINP00000004580	Enolase_C domain-containing protein.	Phosphoglycerate kinase.	0.906