STRINGSTRING
LOC113474176 LOC113474176 Q1RPY5_CIOIN Q1RPY5_CIOIN LOC100175015 LOC100175015 H2XJU0_CIOIN H2XJU0_CIOIN F6W3X7_CIOIN F6W3X7_CIOIN F6W461_CIOIN F6W461_CIOIN LOC100179623 LOC100179623 F6SL96_CIOIN F6SL96_CIOIN LOC100179989 LOC100179989 F6VJQ1_CIOIN F6VJQ1_CIOIN F6VM15_CIOIN F6VM15_CIOIN F6ZJN8_CIOIN F6ZJN8_CIOIN LOC100178703 LOC100178703 LOC100184366 LOC100184366 F6SCJ9_CIOIN F6SCJ9_CIOIN LOC100178755 LOC100178755 jun jun Jnk Jnk Erk5 Erk5 F6QCI8_CIOIN F6QCI8_CIOIN F6ZP37_CIOIN F6ZP37_CIOIN F7BJI5_CIOIN F7BJI5_CIOIN Q4H3C1_CIOIN Q4H3C1_CIOIN F6VXZ5_CIOIN F6VXZ5_CIOIN F6TER2_CIOIN F6TER2_CIOIN F6V7C2_CIOIN F6V7C2_CIOIN F6V6S0_CIOIN F6V6S0_CIOIN F6YEX1_CIOIN F6YEX1_CIOIN Zf(ring)-14 Zf(ring)-14 zf(ring)-24 zf(ring)-24 LOC100182621 LOC100182621 LOC100178481 LOC100178481 F6TI28_CIOIN F6TI28_CIOIN F6VZ78_CIOIN F6VZ78_CIOIN elk elk mapkk3/6 mapkk3/6 Mapkk7 Mapkk7 LOC100184576 LOC100184576 LOC100184240 LOC100184240 F6Y6H6_CIOIN F6Y6H6_CIOIN LOC100186064 LOC100186064 LOC100181494 LOC100181494 F6TTI3_CIOIN F6TTI3_CIOIN F6PS87_CIOIN F6PS87_CIOIN creb/atf-c creb/atf-c LOC100185384 LOC100185384 F6RUS9_CIOIN F6RUS9_CIOIN ikk-epsilon ikk-epsilon Tak1/mapkkk7 Tak1/mapkkk7 r27a r27a LOC100187037 LOC100187037 atf2/7 atf2/7 nfkbp105 nfkbp105 erk1/2 erk1/2 F6SYE0_CIOIN F6SYE0_CIOIN Mapkk4 Mapkk4 F6X7U3_CIOIN F6X7U3_CIOIN F6T957_CIOIN F6T957_CIOIN LOC100178442 LOC100178442 H2XQL2_CIOIN H2XQL2_CIOIN H2XUT3_CIOIN H2XUT3_CIOIN fos fos H2Y0J9_CIOIN H2Y0J9_CIOIN H2Y0N7_CIOIN H2Y0N7_CIOIN H2Y1K9_CIOIN H2Y1K9_CIOIN H2Y256_CIOIN H2Y256_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC113474176kxDL motif-containing protein 1-like. (139 aa)
Q1RPY5_CIOINZinc finger protein. (579 aa)
LOC100175015NF-kappa-B inhibitor-interacting Ras-like protein 2 isoform X1. (192 aa)
H2XJU0_CIOINRibosomal protein S6 kinase. (813 aa)
F6W3X7_CIOINANK_REP_REGION domain-containing protein. (509 aa)
F6W461_CIOINUncharacterized protein. (211 aa)
LOC100179623TNF receptor-associated factor 3-like isoform X1. (351 aa)
F6SL96_CIOINNACHT domain-containing protein. (218 aa)
LOC100179989PPM-type phosphatase domain-containing protein. (490 aa)
F6VJQ1_CIOINUncharacterized protein. (347 aa)
F6VM15_CIOINRanBP2-type domain-containing protein. (339 aa)
F6ZJN8_CIOINUncharacterized protein. (381 aa)
LOC100178703Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (361 aa)
LOC100184366Uncharacterized protein LOC100184366. (391 aa)
F6SCJ9_CIOINUncharacterized protein. (497 aa)
LOC100178755Transmembrane protein 189. (282 aa)
junTranscription factor protein. (381 aa)
JnkMitogen-activated protein kinase. (437 aa)
Erk5Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (820 aa)
F6QCI8_CIOINUncharacterized protein. (352 aa)
F6ZP37_CIOINUncharacterized protein. (310 aa)
F7BJI5_CIOINNACHT domain-containing protein. (190 aa)
Q4H3C1_CIOINIkappaB kinase. (172 aa)
F6VXZ5_CIOINTIR domain-containing protein. (139 aa)
F6TER2_CIOINProtein kinase domain-containing protein. (206 aa)
F6V7C2_CIOINProtein kinase domain-containing protein. (521 aa)
F6V6S0_CIOINUncharacterized protein. (714 aa)
F6YEX1_CIOINUncharacterized protein. (184 aa)
Zf(ring)-14RING-type domain-containing protein. (879 aa)
zf(ring)-24RING-type domain-containing protein. (866 aa)
LOC100182621RING-type domain-containing protein. (672 aa)
LOC100178481TNF receptor-associated factor 3. (369 aa)
F6TI28_CIOINMitogen-activated protein kinase. (364 aa)
F6VZ78_CIOINMATH domain-containing protein. (193 aa)
elkTranscription factor protein. (946 aa)
mapkk3/6Protein kinase domain-containing protein. (348 aa)
Mapkk7Protein kinase domain-containing protein. (478 aa)
LOC100184576TNF receptor-associated factor 3-like. (290 aa)
LOC100184240Ubiquitin-conjugating enzyme E2 35-like isoform X2; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
F6Y6H6_CIOINBZIP domain-containing protein. (449 aa)
LOC100186064Serine/threonine-protein phosphatase. (314 aa)
LOC100181494Baculoviral IAP repeat-containing protein 3. (986 aa)
F6TTI3_CIOINUbiquitin carboxyl-terminal hydrolase. (512 aa)
F6PS87_CIOINRING-type domain-containing protein. (713 aa)
creb/atf-cTranscription factor Ci-CREB/ATF-c isoform X1. (298 aa)
LOC100185384ubiquitin-60S ribosomal protein L40. (128 aa)
F6RUS9_CIOINUncharacterized protein. (414 aa)
ikk-epsilonikappaB kinase isoform X1. (797 aa)
Tak1/mapkkk7Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (190 aa)
r27aR27a protein isoform X1. (155 aa)
LOC100187037Uncharacterized protein. (520 aa)
atf2/7Transcription factor protein. (631 aa)
nfkbp105Uncharacterized protein. (1202 aa)
erk1/2Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (350 aa)
F6SYE0_CIOINProtein kinase domain-containing protein. (216 aa)
Mapkk4Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (475 aa)
F6X7U3_CIOINLisH domain-containing protein. (1112 aa)
F6T957_CIOINUncharacterized protein. (589 aa)
LOC100178442MATH domain-containing protein. (204 aa)
H2XQL2_CIOINUncharacterized protein. (460 aa)
H2XUT3_CIOINUncharacterized protein. (511 aa)
fosTranscription factor protein. (501 aa)
H2Y0J9_CIOINTIR domain-containing protein. (125 aa)
H2Y0N7_CIOINPkinase_Tyr domain-containing protein. (196 aa)
H2Y1K9_CIOINUncharacterized protein. (674 aa)
H2Y256_CIOINUncharacterized protein. (395 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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