STRINGSTRING
H2XJF2_CIOIN H2XJF2_CIOIN LOC100184240 LOC100184240 LOC100184788 LOC100184788 LOC100181294 LOC100181294 LOC100186582 LOC100186582 LOC100179217 LOC100179217 F6UCD8_CIOIN F6UCD8_CIOIN F7BL69_CIOIN F7BL69_CIOIN LOC100185458 LOC100185458 r27a r27a LOC100176736 LOC100176736 LOC100176751 LOC100176751 LOC100180665 LOC100180665 LOC100185384 LOC100185384 LOC100184659 LOC100184659 H2XMA1_CIOIN H2XMA1_CIOIN LOC113474176 LOC113474176 H2XPH2_CIOIN H2XPH2_CIOIN LOC100181401 LOC100181401 F6ZRJ8_CIOIN F6ZRJ8_CIOIN F7B8G2_CIOIN F7B8G2_CIOIN F6VK85_CIOIN F6VK85_CIOIN F6W9U8_CIOIN F6W9U8_CIOIN F6WWC7_CIOIN F6WWC7_CIOIN LOC100185176 LOC100185176 F6RJ65_CIOIN F6RJ65_CIOIN LOC100176030 LOC100176030 LOC100183146 LOC100183146 H2XM17_CIOIN H2XM17_CIOIN LOC100182401 LOC100182401 H2XJI2_CIOIN H2XJI2_CIOIN LOC100185572 LOC100185572 LOC100181387 LOC100181387 F6VJQ1_CIOIN F6VJQ1_CIOIN LOC100180662 LOC100180662 F6RF40_CIOIN F6RF40_CIOIN F6ZFT6_CIOIN F6ZFT6_CIOIN F6SFI7_CIOIN F6SFI7_CIOIN F6T4G2_CIOIN F6T4G2_CIOIN LOC100184598 LOC100184598 LOC100177011 LOC100177011 LOC100186367 LOC100186367 LOC100186959 LOC100186959 LOC100175499 LOC100175499 F6UI30_CIOIN F6UI30_CIOIN F6XUK1_CIOIN F6XUK1_CIOIN LOC100183014 LOC100183014 LOC100178975 LOC100178975 F7ADE5_CIOIN F7ADE5_CIOIN ck2a ck2a F6R6J0_CIOIN F6R6J0_CIOIN LOC100175966 LOC100175966 LOC100178755 LOC100178755 LOC100178709 LOC100178709 F6QB29_CIOIN F6QB29_CIOIN LOC100180836 LOC100180836 F7A9X0_CIOIN F7A9X0_CIOIN F6TGX2_CIOIN F6TGX2_CIOIN LOC100176021 LOC100176021 LOC100181688 LOC100181688 LOC100182743 LOC100182743 LOC100178867 LOC100178867 F6ZJN8_CIOIN F6ZJN8_CIOIN LOC101242512 LOC101242512 F6ZAD3_CIOIN F6ZAD3_CIOIN F7BH38_CIOIN F7BH38_CIOIN F6W8M0_CIOIN F6W8M0_CIOIN LOC100184511 LOC100184511 LOC100186482 LOC100186482 F6VDC4_CIOIN F6VDC4_CIOIN LOC100179235 LOC100179235 atg5 atg5 LOC100185215 LOC100185215 H2XTK8_CIOIN H2XTK8_CIOIN H2XRY3_CIOIN H2XRY3_CIOIN H2XXK5_CIOIN H2XXK5_CIOIN H2XY09_CIOIN H2XY09_CIOIN H2XX55_CIOIN H2XX55_CIOIN H2XWT8_CIOIN H2XWT8_CIOIN H2XWC7_CIOIN H2XWC7_CIOIN LOC100175581 LOC100175581 F6SNM2_CIOIN F6SNM2_CIOIN F6TZ29_CIOIN F6TZ29_CIOIN LOC100187265 LOC100187265 LOC100186746 LOC100186746 LOC101243041 LOC101243041 LOC100176174 LOC100176174 LOC100186285 LOC100186285 F7BML6_CIOIN F7BML6_CIOIN F7BMZ0_CIOIN F7BMZ0_CIOIN F6YG27_CIOIN F6YG27_CIOIN ck2b ck2b F7AVM0_CIOIN F7AVM0_CIOIN F7AVR8_CIOIN F7AVR8_CIOIN F6U899_CIOIN F6U899_CIOIN H2Y2T2_CIOIN H2Y2T2_CIOIN LOC100181499 LOC100181499 LOC101242365 LOC101242365 H2Y066_CIOIN H2Y066_CIOIN dynll6 dynll6 H2XZ21_CIOIN H2XZ21_CIOIN LOC100177927 LOC100177927 LOC100178444 LOC100178444
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H2XJF2_CIOINPhosphatidylinositol 3-kinase catalytic subunit type 3. (931 aa)
LOC100184240Ubiquitin-conjugating enzyme E2 35-like isoform X2; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
LOC100184788Non-specific serine/threonine protein kinase. (554 aa)
LOC100181294Uncharacterized protein. (830 aa)
LOC100186582Phosphoinositide 3-kinase regulatory subunit 4. (1337 aa)
LOC100179217GTP-binding protein Rheb. (183 aa)
F6UCD8_CIOINUncharacterized protein. (681 aa)
F7BL69_CIOINWD_REPEATS_REGION domain-containing protein. (598 aa)
LOC100185458Uncharacterized protein LOC100185458. (315 aa)
r27aR27a protein isoform X1. (155 aa)
LOC100176736Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (452 aa)
LOC100176751UV radiation resistance associated protein. (760 aa)
LOC100180665Ras-related GTP-binding protein C. (371 aa)
LOC100185384ubiquitin-60S ribosomal protein L40. (128 aa)
LOC100184659AMPKBI domain-containing protein. (227 aa)
H2XMA1_CIOINUncharacterized protein. (168 aa)
LOC113474176kxDL motif-containing protein 1-like. (139 aa)
H2XPH2_CIOINDUF3385 domain-containing protein. (265 aa)
LOC100181401WD repeat domain phosphoinositide-interacting protein 4. (344 aa)
F6ZRJ8_CIOINUncharacterized protein. (365 aa)
F7B8G2_CIOINTPR_REGION domain-containing protein. (659 aa)
F6VK85_CIOINUncharacterized protein; Belongs to the PI3/PI4-kinase family. (754 aa)
F6W9U8_CIOINPB1 domain-containing protein. (224 aa)
F6WWC7_CIOINUncharacterized protein; Belongs to the tubulin family. (464 aa)
LOC100185176Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
F6RJ65_CIOINUncharacterized protein; Belongs to the PI3/PI4-kinase family. (268 aa)
LOC100176030WD_REPEATS_REGION domain-containing protein. (1206 aa)
LOC100183146Uncharacterized protein. (165 aa)
H2XM17_CIOINFAT domain-containing protein. (187 aa)
LOC100182401Beclin 1-associated autophagy-related key regulator. (512 aa)
H2XJI2_CIOINUncharacterized protein. (98 aa)
LOC100185572Charged multivesicular body protein 4b-like isoform X1. (217 aa)
LOC100181387Magnesium-dependent phosphatase 1-like. (168 aa)
F6VJQ1_CIOINUncharacterized protein. (347 aa)
LOC100180662Charged multivesicular body protein 6-B-like. (204 aa)
F6RF40_CIOINAutophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (254 aa)
F6ZFT6_CIOINUncharacterized protein. (454 aa)
F6SFI7_CIOINCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (495 aa)
F6T4G2_CIOINN_BRCA1_IG domain-containing protein. (218 aa)
LOC100184598Sequestosome-1 isoform X1. (329 aa)
LOC100177011Ragulator complex protein LAMTOR2-B. (127 aa)
LOC100186367Gamma-aminobutyric acid receptor-associated protein. (117 aa)
LOC100186959Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (447 aa)
LOC100175499WD_REPEATS_REGION domain-containing protein. (610 aa)
F6UI30_CIOINDynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (184 aa)
F6XUK1_CIOINUncharacterized protein. (211 aa)
LOC100183014Transcription termination factor 3, mitochondrial isoform X1. (389 aa)
LOC100178975Charged multivesicular body protein 2a-like. (222 aa)
F7ADE5_CIOINAPG6 domain-containing protein. (127 aa)
ck2aCasein kinase 2 alpha subunit; Belongs to the protein kinase superfamily. (385 aa)
F6R6J0_CIOINUncharacterized protein. (585 aa)
LOC100175966Glial fibrillary acidic protein; Belongs to the intermediate filament family. (438 aa)
LOC100178755Transmembrane protein 189. (282 aa)
LOC100178709Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
F6QB29_CIOINTubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
LOC100180836WD repeat domain phosphoinositide-interacting protein 3. (336 aa)
F7A9X0_CIOINProtein kinase domain-containing protein. (772 aa)
F6TGX2_CIOINUncharacterized protein. (315 aa)
LOC100176021Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (407 aa)
LOC100181688Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
LOC100182743Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
LOC100178867Mitochondrial import receptor subunit TOM40 homolog isoform X1. (338 aa)
F6ZJN8_CIOINUncharacterized protein. (381 aa)
LOC101242512Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (446 aa)
F6ZAD3_CIOINRap-GAP domain-containing protein. (1434 aa)
F7BH38_CIOINUncharacterized protein. (326 aa)
F6W8M0_CIOINTransmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (565 aa)
LOC100184511Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (446 aa)
LOC100186482Sodium-coupled neutral amino acid transporter 9-like. (460 aa)
F6VDC4_CIOINDynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (761 aa)
LOC100179235N_BRCA1_IG domain-containing protein. (241 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (268 aa)
LOC100185215Autophagy-related protein 101. (227 aa)
H2XTK8_CIOINThioredoxin domain-containing protein. (221 aa)
H2XRY3_CIOINUncharacterized protein. (183 aa)
H2XXK5_CIOINThioredoxin domain-containing protein. (429 aa)
H2XY09_CIOINUncharacterized protein. (116 aa)
H2XX55_CIOINUncharacterized protein. (233 aa)
H2XWT8_CIOINUncharacterized protein. (206 aa)
H2XWC7_CIOINUncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (170 aa)
LOC100175581Uncharacterized protein LOC100175581. (186 aa)
F6SNM2_CIOINAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (737 aa)
F6TZ29_CIOINUbiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy. (678 aa)
LOC100187265Uncharacterized protein. (949 aa)
LOC100186746Autophagy-related protein 3. (311 aa)
LOC101243041Autophagy_act_C domain-containing protein. (128 aa)
LOC100176174Uncharacterized protein. (221 aa)
LOC100186285Target of rapamycin complex subunit lst8. (322 aa)
F7BML6_CIOINWD_REPEATS_REGION domain-containing protein. (528 aa)
F7BMZ0_CIOINUncharacterized protein. (245 aa)
F6YG27_CIOINUncharacterized protein. (446 aa)
ck2bCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (215 aa)
F7AVM0_CIOINUncharacterized protein. (535 aa)
F7AVR8_CIOINUncharacterized protein. (175 aa)
F6U899_CIOINDJ-1_PfpI domain-containing protein. (187 aa)
H2Y2T2_CIOINFAT domain-containing protein. (235 aa)
LOC100181499Uncharacterized protein LOC100181499. (166 aa)
LOC101242365Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (98 aa)
H2Y066_CIOINUncharacterized protein. (361 aa)
dynll6Dynein light chain. (89 aa)
H2XZ21_CIOINTubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (220 aa)
LOC100177927FUN14 domain-containing protein 1B-like isoform X1. (146 aa)
LOC100178444Microtubule-associated proteins 1A/1B light chain 3B-like. (121 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.