(15 nodes) Sealing of the nuclear envelope (NE) by ESCRT-III network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100180662	Charged multivesicular body protein 6-B-like. (204 aa)
	F6ZFT6_CIOIN	Uncharacterized protein. (454 aa)
	LOC100178072	Uncharacterized protein. (915 aa)
	F6XUK1_CIOIN	Uncharacterized protein. (211 aa)
	LOC100178975	Charged multivesicular body protein 2a-like. (222 aa)
	LOC100184880	Fidgetin-like protein 1; Belongs to the AAA ATPase family. (597 aa)
	LOC100184384	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays. (542 aa)
	F6W8M0_CIOIN	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (565 aa)
	LOC100176174	Uncharacterized protein. (221 aa)
	F6V6L4_CIOIN	Uncharacterized protein. (420 aa)
	F6SCE7_CIOIN	Uncharacterized protein. (361 aa)
	F6WAJ0_CIOIN	ATPase_AAA_core domain-containing protein. (322 aa)
	LOC100178418	Uncharacterized protein; Belongs to the AAA ATPase family. (468 aa)
	LOC100185572	Charged multivesicular body protein 4b-like isoform X1. (217 aa)
	LOC100181387	Magnesium-dependent phosphatase 1-like. (168 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6SCE7_CIOIN	F6V6L4_CIOIN	ENSCINP00000005933	ENSCINP00000008807	Uncharacterized protein.	Uncharacterized protein.	0.658
F6SCE7_CIOIN	F6W8M0_CIOIN	ENSCINP00000005933	ENSCINP00000014563	Uncharacterized protein.	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.	0.858
F6SCE7_CIOIN	F6WAJ0_CIOIN	ENSCINP00000005933	ENSCINP00000002243	Uncharacterized protein.	ATPase_AAA_core domain-containing protein.	0.658
F6SCE7_CIOIN	F6XUK1_CIOIN	ENSCINP00000005933	ENSCINP00000022775	Uncharacterized protein.	Uncharacterized protein.	0.801
F6SCE7_CIOIN	F6ZFT6_CIOIN	ENSCINP00000005933	ENSCINP00000024521	Uncharacterized protein.	Uncharacterized protein.	0.867
F6SCE7_CIOIN	LOC100176174	ENSCINP00000005933	ENSCINP00000009335	Uncharacterized protein.	Uncharacterized protein.	0.923
F6SCE7_CIOIN	LOC100178072	ENSCINP00000005933	ENSCINP00000024160	Uncharacterized protein.	Uncharacterized protein.	0.726
F6SCE7_CIOIN	LOC100178418	ENSCINP00000005933	ENSCINP00000036380	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.810
F6SCE7_CIOIN	LOC100178975	ENSCINP00000005933	ENSCINP00000021747	Uncharacterized protein.	Charged multivesicular body protein 2a-like.	0.926
F6SCE7_CIOIN	LOC100180662	ENSCINP00000005933	ENSCINP00000026802	Uncharacterized protein.	Charged multivesicular body protein 6-B-like.	0.897
F6SCE7_CIOIN	LOC100181387	ENSCINP00000005933	ENSCINP00000028838	Uncharacterized protein.	Magnesium-dependent phosphatase 1-like.	0.530
F6SCE7_CIOIN	LOC100184384	ENSCINP00000005933	ENSCINP00000018769	Uncharacterized protein.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.714
F6SCE7_CIOIN	LOC100184880	ENSCINP00000005933	ENSCINP00000019442	Uncharacterized protein.	Fidgetin-like protein 1; Belongs to the AAA ATPase family.	0.810
F6SCE7_CIOIN	LOC100185572	ENSCINP00000005933	ENSCINP00000029641	Uncharacterized protein.	Charged multivesicular body protein 4b-like isoform X1.	0.948
F6V6L4_CIOIN	F6SCE7_CIOIN	ENSCINP00000008807	ENSCINP00000005933	Uncharacterized protein.	Uncharacterized protein.	0.658
F6V6L4_CIOIN	F6WAJ0_CIOIN	ENSCINP00000008807	ENSCINP00000002243	Uncharacterized protein.	ATPase_AAA_core domain-containing protein.	0.900
F6V6L4_CIOIN	F6ZFT6_CIOIN	ENSCINP00000008807	ENSCINP00000024521	Uncharacterized protein.	Uncharacterized protein.	0.473
F6V6L4_CIOIN	LOC100176174	ENSCINP00000008807	ENSCINP00000009335	Uncharacterized protein.	Uncharacterized protein.	0.593
F6V6L4_CIOIN	LOC100178975	ENSCINP00000008807	ENSCINP00000021747	Uncharacterized protein.	Charged multivesicular body protein 2a-like.	0.450
F6V6L4_CIOIN	LOC100180662	ENSCINP00000008807	ENSCINP00000026802	Uncharacterized protein.	Charged multivesicular body protein 6-B-like.	0.432