(9 nodes) Heme signaling network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100184417	Exportin-1. (1071 aa)
	H2XT83_CIOIN	Uncharacterized protein. (416 aa)
	F6WM68_CIOIN	Uncharacterized protein. (172 aa)
	F6YF25_CIOIN	VWFA domain-containing protein. (266 aa)
	F6YW14_CIOIN	Uncharacterized protein. (170 aa)
	F6VMK4_CIOIN	BTB domain-containing protein. (147 aa)
	LOC100175978	Proton-coupled folate transporter. (455 aa)
	LOC778757	BZIP domain-containing protein. (161 aa)
	Bach	BZIP domain-containing protein. (508 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Bach	F6VMK4_CIOIN	ENSCINP00000012430	ENSCINP00000026547	BZIP domain-containing protein.	BTB domain-containing protein.	0.403
Bach	LOC100184417	ENSCINP00000012430	ENSCINP00000029913	BZIP domain-containing protein.	Exportin-1.	0.555
Bach	LOC778757	ENSCINP00000012430	ENSCINP00000002549	BZIP domain-containing protein.	BZIP domain-containing protein.	0.834
F6VMK4_CIOIN	Bach	ENSCINP00000026547	ENSCINP00000012430	BTB domain-containing protein.	BZIP domain-containing protein.	0.403
F6VMK4_CIOIN	LOC100184417	ENSCINP00000026547	ENSCINP00000029913	BTB domain-containing protein.	Exportin-1.	0.555
F6VMK4_CIOIN	LOC778757	ENSCINP00000026547	ENSCINP00000002549	BTB domain-containing protein.	BZIP domain-containing protein.	0.765
LOC100184417	Bach	ENSCINP00000029913	ENSCINP00000012430	Exportin-1.	BZIP domain-containing protein.	0.555
LOC100184417	F6VMK4_CIOIN	ENSCINP00000029913	ENSCINP00000026547	Exportin-1.	BTB domain-containing protein.	0.555
LOC100184417	LOC778757	ENSCINP00000029913	ENSCINP00000002549	Exportin-1.	BZIP domain-containing protein.	0.504
LOC778757	Bach	ENSCINP00000002549	ENSCINP00000012430	BZIP domain-containing protein.	BZIP domain-containing protein.	0.834
LOC778757	F6VMK4_CIOIN	ENSCINP00000002549	ENSCINP00000026547	BZIP domain-containing protein.	BTB domain-containing protein.	0.765
LOC778757	LOC100184417	ENSCINP00000002549	ENSCINP00000029913	BZIP domain-containing protein.	Exportin-1.	0.504