(5 nodes) Thioesterase superfamily network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6TU49_CIOIN	Uncharacterized protein. (540 aa)
	F6W2I6_CIOIN	4HBT domain-containing protein. (177 aa)
	LOC100180197	Uncharacterized protein LOC100180197 isoform X1. (182 aa)
	F6YNB1_CIOIN	4HBT domain-containing protein. (143 aa)
	F6YXK3_CIOIN	Uncharacterized protein. (326 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6TU49_CIOIN	F6YNB1_CIOIN	ENSCINP00000022887	ENSCINP00000028531	Uncharacterized protein.	4HBT domain-containing protein.	0.499
F6TU49_CIOIN	F6YXK3_CIOIN	ENSCINP00000022887	ENSCINP00000012561	Uncharacterized protein.	Uncharacterized protein.	0.571
F6W2I6_CIOIN	F6YNB1_CIOIN	ENSCINP00000004633	ENSCINP00000028531	4HBT domain-containing protein.	4HBT domain-containing protein.	0.502
F6YNB1_CIOIN	F6TU49_CIOIN	ENSCINP00000028531	ENSCINP00000022887	4HBT domain-containing protein.	Uncharacterized protein.	0.499
F6YNB1_CIOIN	F6W2I6_CIOIN	ENSCINP00000028531	ENSCINP00000004633	4HBT domain-containing protein.	4HBT domain-containing protein.	0.502
F6YNB1_CIOIN	F6YXK3_CIOIN	ENSCINP00000028531	ENSCINP00000012561	4HBT domain-containing protein.	Uncharacterized protein.	0.597
F6YNB1_CIOIN	LOC100180197	ENSCINP00000028531	ENSCINP00000001459	4HBT domain-containing protein.	Uncharacterized protein LOC100180197 isoform X1.	0.502
F6YXK3_CIOIN	F6TU49_CIOIN	ENSCINP00000012561	ENSCINP00000022887	Uncharacterized protein.	Uncharacterized protein.	0.571
F6YXK3_CIOIN	F6YNB1_CIOIN	ENSCINP00000012561	ENSCINP00000028531	Uncharacterized protein.	4HBT domain-containing protein.	0.597
LOC100180197	F6YNB1_CIOIN	ENSCINP00000001459	ENSCINP00000028531	Uncharacterized protein LOC100180197 isoform X1.	4HBT domain-containing protein.	0.502