7 items (Ciona intestinalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	fgf4/5/6	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (229 aa)
	Fgf11/12/13/14	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (182 aa)
	Fgf9/16/20	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (297 aa)
	pax2/5/8-b	Paired domain-containing protein. (1284 aa)
	pax258	Uncharacterized protein. (235 aa)
	Bmp2/4	TGFb_propeptide domain-containing protein. (376 aa)
	otx2	Transcription factor protein. (425 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Bmp2/4	Fgf9/16/20	ENSCINP00000031019	ENSCINP00000009154	TGFb_propeptide domain-containing protein.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.664
Bmp2/4	fgf4/5/6	ENSCINP00000031019	ENSCINP00000001146	TGFb_propeptide domain-containing protein.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.552
Bmp2/4	otx2	ENSCINP00000031019	ENSCINP00000031453	TGFb_propeptide domain-containing protein.	Transcription factor protein.	0.601
Fgf11/12/13/14	otx2	ENSCINP00000008466	ENSCINP00000031453	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Transcription factor protein.	0.502
Fgf9/16/20	Bmp2/4	ENSCINP00000009154	ENSCINP00000031019	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	TGFb_propeptide domain-containing protein.	0.664
Fgf9/16/20	fgf4/5/6	ENSCINP00000009154	ENSCINP00000001146	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.473
Fgf9/16/20	otx2	ENSCINP00000009154	ENSCINP00000031453	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Transcription factor protein.	0.574
Fgf9/16/20	pax258	ENSCINP00000009154	ENSCINP00000014209	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Uncharacterized protein.	0.442
fgf4/5/6	Bmp2/4	ENSCINP00000001146	ENSCINP00000031019	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	TGFb_propeptide domain-containing protein.	0.552
fgf4/5/6	Fgf9/16/20	ENSCINP00000001146	ENSCINP00000009154	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.473
fgf4/5/6	otx2	ENSCINP00000001146	ENSCINP00000031453	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Transcription factor protein.	0.718
fgf4/5/6	pax258	ENSCINP00000001146	ENSCINP00000014209	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Uncharacterized protein.	0.400
otx2	Bmp2/4	ENSCINP00000031453	ENSCINP00000031019	Transcription factor protein.	TGFb_propeptide domain-containing protein.	0.601
otx2	Fgf11/12/13/14	ENSCINP00000031453	ENSCINP00000008466	Transcription factor protein.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.502
otx2	Fgf9/16/20	ENSCINP00000031453	ENSCINP00000009154	Transcription factor protein.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.574
otx2	fgf4/5/6	ENSCINP00000031453	ENSCINP00000001146	Transcription factor protein.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.718
otx2	pax2/5/8-b	ENSCINP00000031453	ENSCINP00000012344	Transcription factor protein.	Paired domain-containing protein.	0.653
otx2	pax258	ENSCINP00000031453	ENSCINP00000014209	Transcription factor protein.	Uncharacterized protein.	0.540
pax2/5/8-b	otx2	ENSCINP00000012344	ENSCINP00000031453	Paired domain-containing protein.	Transcription factor protein.	0.653
pax2/5/8-b	pax258	ENSCINP00000012344	ENSCINP00000014209	Paired domain-containing protein.	Uncharacterized protein.	0.540