19 items (Ciona intestinalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100184552	Uncharacterized protein; Belongs to the calmodulin family. (150 aa)
	LOC100185663	Vinculin. (1062 aa)
	cdc42	Uncharacterized protein. (95 aa)
	act	Act protein isoform X1. (375 aa)
	gsk	Glycogen synthase kinase Alpha/beta. (407 aa)
	LOC100177479	Uncharacterized protein; Belongs to the actin family. (370 aa)
	rhoc	RhoA protein. (193 aa)
	Ptp	Tyrosine-protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily. (987 aa)
	LOC113474034	P/Homo B domain-containing protein; Belongs to the peptidase S8 family. (607 aa)
	LOC100181538	Uncharacterized protein. (157 aa)
	LOC494376	Calmodulin-like. (170 aa)
	Cam	Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases. (149 aa)
	LOC100178859	Calmodulin-2/4-like. (158 aa)
	LOC100185723	Calmodulin-2/4-like. (160 aa)
	cam-k	Calmodulin-dependent protein kinase homologue isoform X1; Belongs to the protein kinase superfamily. (324 aa)
	F6PQ89_CIOIN	Uncharacterized protein. (150 aa)
	Ciarr	Arrestin_C domain-containing protein. (253 aa)
	H2XP64_CIOIN	Uncharacterized protein. (157 aa)
	LOC100186781	Calmodulin-like protein 4. (154 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cam	LOC100177479	ENSCINP00000017572	ENSCINP00000006055	Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.	Uncharacterized protein; Belongs to the actin family.	0.542
Cam	act	ENSCINP00000017572	ENSCINP00000001538	Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.	Act protein isoform X1.	0.573
Cam	cam-k	ENSCINP00000017572	ENSCINP00000023118	Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.	Calmodulin-dependent protein kinase homologue isoform X1; Belongs to the protein kinase superfamily.	0.693
Cam	rhoc	ENSCINP00000017572	ENSCINP00000006386	Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.	RhoA protein.	0.431
Ciarr	LOC100185663	ENSCINP00000029120	ENSCINP00000036097	Arrestin_C domain-containing protein.	Vinculin.	0.480
F6PQ89_CIOIN	LOC100177479	ENSCINP00000025381	ENSCINP00000006055	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.483
F6PQ89_CIOIN	act	ENSCINP00000025381	ENSCINP00000001538	Uncharacterized protein.	Act protein isoform X1.	0.514
F6PQ89_CIOIN	cam-k	ENSCINP00000025381	ENSCINP00000023118	Uncharacterized protein.	Calmodulin-dependent protein kinase homologue isoform X1; Belongs to the protein kinase superfamily.	0.650
F6PQ89_CIOIN	rhoc	ENSCINP00000025381	ENSCINP00000006386	Uncharacterized protein.	RhoA protein.	0.435
H2XP64_CIOIN	LOC100177479	ENSCINP00000031447	ENSCINP00000006055	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.483
H2XP64_CIOIN	act	ENSCINP00000031447	ENSCINP00000001538	Uncharacterized protein.	Act protein isoform X1.	0.514
H2XP64_CIOIN	cam-k	ENSCINP00000031447	ENSCINP00000023118	Uncharacterized protein.	Calmodulin-dependent protein kinase homologue isoform X1; Belongs to the protein kinase superfamily.	0.645
H2XP64_CIOIN	rhoc	ENSCINP00000031447	ENSCINP00000006386	Uncharacterized protein.	RhoA protein.	0.429
LOC100177479	Cam	ENSCINP00000006055	ENSCINP00000017572	Uncharacterized protein; Belongs to the actin family.	Calmodulin; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.	0.542
LOC100177479	F6PQ89_CIOIN	ENSCINP00000006055	ENSCINP00000025381	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.483
LOC100177479	H2XP64_CIOIN	ENSCINP00000006055	ENSCINP00000031447	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.483
LOC100177479	LOC100178859	ENSCINP00000006055	ENSCINP00000021258	Uncharacterized protein; Belongs to the actin family.	Calmodulin-2/4-like.	0.483
LOC100177479	LOC100181538	ENSCINP00000006055	ENSCINP00000012845	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.483
LOC100177479	LOC100184552	ENSCINP00000006055	ENSCINP00000001155	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein; Belongs to the calmodulin family.	0.483
LOC100177479	LOC100185663	ENSCINP00000006055	ENSCINP00000036097	Uncharacterized protein; Belongs to the actin family.	Vinculin.	0.616