(16 nodes) SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2XSI1_CIOIN	SET domain-containing protein. (203 aa)
	F6PQ66_CIOIN	Uncharacterized protein. (1315 aa)
	F6SQS1_CIOIN	SET domain-containing protein. (192 aa)
	F6XZR7_CIOIN	Uncharacterized protein. (543 aa)
	F6UMR8_CIOIN	Uncharacterized protein. (477 aa)
	F6W5Y6_CIOIN	Uncharacterized protein. (406 aa)
	F6RSF3_CIOIN	SET domain-containing protein. (227 aa)
	F6VYY7_CIOIN	Uncharacterized protein. (589 aa)
	smyd1	Uncharacterized protein. (474 aa)
	F6S6D2_CIOIN	Uncharacterized protein. (589 aa)
	LOC100179624	Histone-lysine N-methyltransferase SMYD3. (430 aa)
	F6WQW9_CIOIN	Uncharacterized protein. (301 aa)
	H2XTY2_CIOIN	Uncharacterized protein. (882 aa)
	F6SXS1_CIOIN	Uncharacterized protein. (932 aa)
	F6VU73_CIOIN	SET domain-containing protein. (453 aa)
	F6YDS2_CIOIN	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (434 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6PQ66_CIOIN	F6S6D2_CIOIN	ENSCINP00000025384	ENSCINP00000011316	Uncharacterized protein.	Uncharacterized protein.	0.567
F6PQ66_CIOIN	F6VU73_CIOIN	ENSCINP00000025384	ENSCINP00000024302	Uncharacterized protein.	SET domain-containing protein.	0.494
F6PQ66_CIOIN	F6VYY7_CIOIN	ENSCINP00000025384	ENSCINP00000003156	Uncharacterized protein.	Uncharacterized protein.	0.703
F6PQ66_CIOIN	H2XTY2_CIOIN	ENSCINP00000025384	ENSCINP00000033116	Uncharacterized protein.	Uncharacterized protein.	0.599
F6RSF3_CIOIN	F6SQS1_CIOIN	ENSCINP00000001120	ENSCINP00000025690	SET domain-containing protein.	SET domain-containing protein.	0.617
F6RSF3_CIOIN	F6UMR8_CIOIN	ENSCINP00000001120	ENSCINP00000025949	SET domain-containing protein.	Uncharacterized protein.	0.489
F6RSF3_CIOIN	F6W5Y6_CIOIN	ENSCINP00000001120	ENSCINP00000028043	SET domain-containing protein.	Uncharacterized protein.	0.512
F6RSF3_CIOIN	F6WQW9_CIOIN	ENSCINP00000001120	ENSCINP00000016333	SET domain-containing protein.	Uncharacterized protein.	0.493
F6RSF3_CIOIN	F6YDS2_CIOIN	ENSCINP00000001120	ENSCINP00000024599	SET domain-containing protein.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.535
F6RSF3_CIOIN	H2XTY2_CIOIN	ENSCINP00000001120	ENSCINP00000033116	SET domain-containing protein.	Uncharacterized protein.	0.525
F6S6D2_CIOIN	F6PQ66_CIOIN	ENSCINP00000011316	ENSCINP00000025384	Uncharacterized protein.	Uncharacterized protein.	0.567
F6S6D2_CIOIN	F6UMR8_CIOIN	ENSCINP00000011316	ENSCINP00000025949	Uncharacterized protein.	Uncharacterized protein.	0.452
F6S6D2_CIOIN	F6VU73_CIOIN	ENSCINP00000011316	ENSCINP00000024302	Uncharacterized protein.	SET domain-containing protein.	0.526
F6S6D2_CIOIN	F6VYY7_CIOIN	ENSCINP00000011316	ENSCINP00000003156	Uncharacterized protein.	Uncharacterized protein.	0.574
F6S6D2_CIOIN	LOC100179624	ENSCINP00000011316	ENSCINP00000013431	Uncharacterized protein.	Histone-lysine N-methyltransferase SMYD3.	0.462
F6S6D2_CIOIN	smyd1	ENSCINP00000011316	ENSCINP00000006865	Uncharacterized protein.	Uncharacterized protein.	0.404
F6SQS1_CIOIN	F6RSF3_CIOIN	ENSCINP00000025690	ENSCINP00000001120	SET domain-containing protein.	SET domain-containing protein.	0.617
F6SQS1_CIOIN	F6WQW9_CIOIN	ENSCINP00000025690	ENSCINP00000016333	SET domain-containing protein.	Uncharacterized protein.	0.401
F6SXS1_CIOIN	F6YDS2_CIOIN	ENSCINP00000019485	ENSCINP00000024599	Uncharacterized protein.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.444
F6UMR8_CIOIN	F6RSF3_CIOIN	ENSCINP00000025949	ENSCINP00000001120	Uncharacterized protein.	SET domain-containing protein.	0.489