10 items (Branchiostoma floridae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XPB7_BRAFL	Uncharacterized protein. (287 aa)
	C3XV15_BRAFL	Uncharacterized protein. (232 aa)
	C3XZD4_BRAFL	Uncharacterized protein. (157 aa)
	C3YBZ7_BRAFL	Uncharacterized protein. (642 aa)
	C3YBZ8_BRAFL	Uncharacterized protein; Belongs to the cytochrome P450 family. (493 aa)
	C3ZA79_BRAFL	SE domain-containing protein. (530 aa)
	C3ZB63_BRAFL	Methyltransf_25 domain-containing protein. (577 aa)
	C3ZMH0_BRAFL	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (279 aa)
	C3ZSQ2_BRAFL	Uncharacterized protein. (246 aa)
	C3ZSQ5_BRAFL	Uncharacterized protein. (167 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XPB7_BRAFL	C3XV15_BRAFL	C3XPB7	C3XV15	Uncharacterized protein.	Uncharacterized protein.	0.683
C3XPB7_BRAFL	C3XZD4_BRAFL	C3XPB7	C3XZD4	Uncharacterized protein.	Uncharacterized protein.	0.976
C3XPB7_BRAFL	C3YBZ7_BRAFL	C3XPB7	C3YBZ7	Uncharacterized protein.	Uncharacterized protein.	0.657
C3XPB7_BRAFL	C3YBZ8_BRAFL	C3XPB7	C3YBZ8	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.981
C3XPB7_BRAFL	C3ZA79_BRAFL	C3XPB7	C3ZA79	Uncharacterized protein.	SE domain-containing protein.	0.981
C3XPB7_BRAFL	C3ZB63_BRAFL	C3XPB7	C3ZB63	Uncharacterized protein.	Methyltransf_25 domain-containing protein.	0.929
C3XPB7_BRAFL	C3ZMH0_BRAFL	C3XPB7	C3ZMH0	Uncharacterized protein.	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	0.809
C3XPB7_BRAFL	C3ZSQ2_BRAFL	C3XPB7	C3ZSQ2	Uncharacterized protein.	Uncharacterized protein.	0.480
C3XPB7_BRAFL	C3ZSQ5_BRAFL	C3XPB7	C3ZSQ5	Uncharacterized protein.	Uncharacterized protein.	0.480
C3XV15_BRAFL	C3XPB7_BRAFL	C3XV15	C3XPB7	Uncharacterized protein.	Uncharacterized protein.	0.683
C3XV15_BRAFL	C3XZD4_BRAFL	C3XV15	C3XZD4	Uncharacterized protein.	Uncharacterized protein.	0.981
C3XV15_BRAFL	C3YBZ7_BRAFL	C3XV15	C3YBZ7	Uncharacterized protein.	Uncharacterized protein.	0.989
C3XV15_BRAFL	C3YBZ8_BRAFL	C3XV15	C3YBZ8	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.988
C3XV15_BRAFL	C3ZA79_BRAFL	C3XV15	C3ZA79	Uncharacterized protein.	SE domain-containing protein.	0.815
C3XV15_BRAFL	C3ZB63_BRAFL	C3XV15	C3ZB63	Uncharacterized protein.	Methyltransf_25 domain-containing protein.	0.895
C3XV15_BRAFL	C3ZMH0_BRAFL	C3XV15	C3ZMH0	Uncharacterized protein.	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	0.961
C3XV15_BRAFL	C3ZSQ2_BRAFL	C3XV15	C3ZSQ2	Uncharacterized protein.	Uncharacterized protein.	0.933
C3XV15_BRAFL	C3ZSQ5_BRAFL	C3XV15	C3ZSQ5	Uncharacterized protein.	Uncharacterized protein.	0.933
C3XZD4_BRAFL	C3XPB7_BRAFL	C3XZD4	C3XPB7	Uncharacterized protein.	Uncharacterized protein.	0.976
C3XZD4_BRAFL	C3XV15_BRAFL	C3XZD4	C3XV15	Uncharacterized protein.	Uncharacterized protein.	0.981