7 items (Branchiostoma floridae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XXC8_BRAFL	RmlD_sub_bind domain-containing protein. (288 aa)
	C3Y7W3_BRAFL	Hcy-binding domain-containing protein. (415 aa)
	C3Z4B8_BRAFL	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. (390 aa)
	C3Z5R5_BRAFL	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. (382 aa)
	MTND_BRAFL	1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). (177 aa)
	C3ZBR3_BRAFL	Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate. (436 aa)
	C3ZEE1_BRAFL	Hcy-binding domain-containing protein. (315 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XXC8_BRAFL	C3Y7W3_BRAFL	C3XXC8	C3Y7W3	RmlD_sub_bind domain-containing protein.	Hcy-binding domain-containing protein.	0.708
C3XXC8_BRAFL	C3Z4B8_BRAFL	C3XXC8	C3Z4B8	RmlD_sub_bind domain-containing protein.	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	0.994
C3XXC8_BRAFL	C3Z5R5_BRAFL	C3XXC8	C3Z5R5	RmlD_sub_bind domain-containing protein.	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	0.994
C3XXC8_BRAFL	C3ZBR3_BRAFL	C3XXC8	C3ZBR3	RmlD_sub_bind domain-containing protein.	Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.	0.911
C3XXC8_BRAFL	C3ZEE1_BRAFL	C3XXC8	C3ZEE1	RmlD_sub_bind domain-containing protein.	Hcy-binding domain-containing protein.	0.908
C3Y7W3_BRAFL	C3XXC8_BRAFL	C3Y7W3	C3XXC8	Hcy-binding domain-containing protein.	RmlD_sub_bind domain-containing protein.	0.708
C3Y7W3_BRAFL	C3Z4B8_BRAFL	C3Y7W3	C3Z4B8	Hcy-binding domain-containing protein.	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	0.779
C3Y7W3_BRAFL	C3Z5R5_BRAFL	C3Y7W3	C3Z5R5	Hcy-binding domain-containing protein.	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	0.779
C3Y7W3_BRAFL	C3ZBR3_BRAFL	C3Y7W3	C3ZBR3	Hcy-binding domain-containing protein.	Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.	0.918
C3Z4B8_BRAFL	C3XXC8_BRAFL	C3Z4B8	C3XXC8	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	RmlD_sub_bind domain-containing protein.	0.994
C3Z4B8_BRAFL	C3Y7W3_BRAFL	C3Z4B8	C3Y7W3	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	Hcy-binding domain-containing protein.	0.779
C3Z4B8_BRAFL	C3Z5R5_BRAFL	C3Z4B8	C3Z5R5	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	0.901
C3Z4B8_BRAFL	C3ZBR3_BRAFL	C3Z4B8	C3ZBR3	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.	0.945
C3Z4B8_BRAFL	C3ZEE1_BRAFL	C3Z4B8	C3ZEE1	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	Hcy-binding domain-containing protein.	0.954
C3Z4B8_BRAFL	MTND_BRAFL	C3Z4B8	C3ZAH2	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).	0.459
C3Z5R5_BRAFL	C3XXC8_BRAFL	C3Z5R5	C3XXC8	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	RmlD_sub_bind domain-containing protein.	0.994
C3Z5R5_BRAFL	C3Y7W3_BRAFL	C3Z5R5	C3Y7W3	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	Hcy-binding domain-containing protein.	0.779
C3Z5R5_BRAFL	C3Z4B8_BRAFL	C3Z5R5	C3Z4B8	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	0.901
C3Z5R5_BRAFL	C3ZBR3_BRAFL	C3Z5R5	C3ZBR3	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.	0.945
C3Z5R5_BRAFL	C3ZEE1_BRAFL	C3Z5R5	C3ZEE1	S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.	Hcy-binding domain-containing protein.	0.954