(6 nodes) DNA translocase activity, and Single-stranded DNA helicase activity network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YAW6_BRAFL	F-box domain-containing protein. (777 aa)
	C3YGI0_BRAFL	AAA domain-containing protein. (449 aa)
	C3YLS0_BRAFL	Uncharacterized protein. (700 aa)
	C3YTH1_BRAFL	Uncharacterized protein. (82 aa)
	C3YZS4_BRAFL	Uncharacterized protein. (122 aa)
	C3Z5F3_BRAFL	Uncharacterized protein. (791 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3YAW6_BRAFL	C3YGI0_BRAFL	C3YAW6	C3YGI0	F-box domain-containing protein.	AAA domain-containing protein.	0.714
C3YAW6_BRAFL	C3YLS0_BRAFL	C3YAW6	C3YLS0	F-box domain-containing protein.	Uncharacterized protein.	0.620
C3YAW6_BRAFL	C3YTH1_BRAFL	C3YAW6	C3YTH1	F-box domain-containing protein.	Uncharacterized protein.	0.845
C3YAW6_BRAFL	C3YZS4_BRAFL	C3YAW6	C3YZS4	F-box domain-containing protein.	Uncharacterized protein.	0.595
C3YAW6_BRAFL	C3Z5F3_BRAFL	C3YAW6	C3Z5F3	F-box domain-containing protein.	Uncharacterized protein.	0.620
C3YGI0_BRAFL	C3YAW6_BRAFL	C3YGI0	C3YAW6	AAA domain-containing protein.	F-box domain-containing protein.	0.714
C3YGI0_BRAFL	C3YTH1_BRAFL	C3YGI0	C3YTH1	AAA domain-containing protein.	Uncharacterized protein.	0.700
C3YLS0_BRAFL	C3YAW6_BRAFL	C3YLS0	C3YAW6	Uncharacterized protein.	F-box domain-containing protein.	0.620
C3YLS0_BRAFL	C3Z5F3_BRAFL	C3YLS0	C3Z5F3	Uncharacterized protein.	Uncharacterized protein.	0.906
C3YTH1_BRAFL	C3YAW6_BRAFL	C3YTH1	C3YAW6	Uncharacterized protein.	F-box domain-containing protein.	0.845
C3YTH1_BRAFL	C3YGI0_BRAFL	C3YTH1	C3YGI0	Uncharacterized protein.	AAA domain-containing protein.	0.700
C3YZS4_BRAFL	C3YAW6_BRAFL	C3YZS4	C3YAW6	Uncharacterized protein.	F-box domain-containing protein.	0.595
C3Z5F3_BRAFL	C3YAW6_BRAFL	C3Z5F3	C3YAW6	Uncharacterized protein.	F-box domain-containing protein.	0.620
C3Z5F3_BRAFL	C3YLS0_BRAFL	C3Z5F3	C3YLS0	Uncharacterized protein.	Uncharacterized protein.	0.906