30 items (Branchiostoma floridae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XXE6_BRAFL	Uncharacterized protein. (384 aa)
	C3XXW9_BRAFL	Uncharacterized protein. (235 aa)
	C3Y6S3_BRAFL	Uncharacterized protein. (136 aa)
	C3Y6S5_BRAFL	Uncharacterized protein. (502 aa)
	C3Y6T8_BRAFL	N-acetyltransferase domain-containing protein. (163 aa)
	C3Y9Y8_BRAFL	Uncharacterized protein. (396 aa)
	C3YG81_BRAFL	Tyrosinase_Cu-bd domain-containing protein. (522 aa)
	C3YHC6_BRAFL	Uncharacterized protein. (129 aa)
	C3YPM9_BRAFL	Amine oxidase. (454 aa)
	C3YPN5_BRAFL	Amine oxidase. (443 aa)
	C3YS28_BRAFL	Uncharacterized protein. (221 aa)
	C3YS29_BRAFL	Uncharacterized protein. (212 aa)
	C3YYK2_BRAFL	Uncharacterized protein. (457 aa)
	C3Z1H9_BRAFL	Uncharacterized protein. (356 aa)
	C3Z1I2_BRAFL	PKS_ER domain-containing protein. (358 aa)
	C3Z1I3_BRAFL	PKS_ER domain-containing protein. (360 aa)
	C3Z1K9_BRAFL	PKS_ER domain-containing protein. (301 aa)
	C3Z220_BRAFL	Uncharacterized protein. (448 aa)
	C3Z5S3_BRAFL	Uncharacterized protein. (265 aa)
	C3Z9J1_BRAFL	Uncharacterized protein. (263 aa)
	C3ZDY9_BRAFL	Uncharacterized protein. (240 aa)
	C3ZEA0_BRAFL	Amine oxidase. (512 aa)
	C3ZEL8_BRAFL	Uncharacterized protein. (69 aa)
	C3ZG55_BRAFL	Uncharacterized protein. (533 aa)
	C3ZNJ1_BRAFL	Uncharacterized protein. (444 aa)
	C3ZP07_BRAFL	Uncharacterized protein. (182 aa)
	C3ZQV3_BRAFL	Uncharacterized protein. (168 aa)
	C3ZRR8_BRAFL	Uncharacterized protein. (489 aa)
	C3ZS18_BRAFL	Uncharacterized protein. (480 aa)
	C3ZWR9_BRAFL	Uncharacterized protein. (489 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XXE6_BRAFL	C3Y6S3_BRAFL	C3XXE6	C3Y6S3	Uncharacterized protein.	Uncharacterized protein.	0.900
C3XXE6_BRAFL	C3Y6S5_BRAFL	C3XXE6	C3Y6S5	Uncharacterized protein.	Uncharacterized protein.	0.902
C3XXE6_BRAFL	C3Y9Y8_BRAFL	C3XXE6	C3Y9Y8	Uncharacterized protein.	Uncharacterized protein.	0.957
C3XXE6_BRAFL	C3YHC6_BRAFL	C3XXE6	C3YHC6	Uncharacterized protein.	Uncharacterized protein.	0.900
C3XXE6_BRAFL	C3ZRR8_BRAFL	C3XXE6	C3ZRR8	Uncharacterized protein.	Uncharacterized protein.	0.904
C3XXE6_BRAFL	C3ZS18_BRAFL	C3XXE6	C3ZS18	Uncharacterized protein.	Uncharacterized protein.	0.904
C3XXE6_BRAFL	C3ZWR9_BRAFL	C3XXE6	C3ZWR9	Uncharacterized protein.	Uncharacterized protein.	0.904
C3XXW9_BRAFL	C3Y6S3_BRAFL	C3XXW9	C3Y6S3	Uncharacterized protein.	Uncharacterized protein.	0.654
C3XXW9_BRAFL	C3Y6S5_BRAFL	C3XXW9	C3Y6S5	Uncharacterized protein.	Uncharacterized protein.	0.669
C3XXW9_BRAFL	C3YHC6_BRAFL	C3XXW9	C3YHC6	Uncharacterized protein.	Uncharacterized protein.	0.650
C3XXW9_BRAFL	C3YPM9_BRAFL	C3XXW9	C3YPM9	Uncharacterized protein.	Amine oxidase.	0.917
C3XXW9_BRAFL	C3YPN5_BRAFL	C3XXW9	C3YPN5	Uncharacterized protein.	Amine oxidase.	0.917
C3XXW9_BRAFL	C3Z1H9_BRAFL	C3XXW9	C3Z1H9	Uncharacterized protein.	Uncharacterized protein.	0.901
C3XXW9_BRAFL	C3Z1I2_BRAFL	C3XXW9	C3Z1I2	Uncharacterized protein.	PKS_ER domain-containing protein.	0.901
C3XXW9_BRAFL	C3Z1I3_BRAFL	C3XXW9	C3Z1I3	Uncharacterized protein.	PKS_ER domain-containing protein.	0.901
C3XXW9_BRAFL	C3Z1K9_BRAFL	C3XXW9	C3Z1K9	Uncharacterized protein.	PKS_ER domain-containing protein.	0.901
C3XXW9_BRAFL	C3Z5S3_BRAFL	C3XXW9	C3Z5S3	Uncharacterized protein.	Uncharacterized protein.	0.905
C3XXW9_BRAFL	C3ZDY9_BRAFL	C3XXW9	C3ZDY9	Uncharacterized protein.	Uncharacterized protein.	0.900
C3XXW9_BRAFL	C3ZEA0_BRAFL	C3XXW9	C3ZEA0	Uncharacterized protein.	Amine oxidase.	0.917
C3XXW9_BRAFL	C3ZEL8_BRAFL	C3XXW9	C3ZEL8	Uncharacterized protein.	Uncharacterized protein.	0.914