(28 nodes) Fanconi Anemia Pathway network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XPP2_BRAFL	Uncharacterized protein. (75 aa)
	C3XPU5_BRAFL	ERCC4 domain-containing protein. (1825 aa)
	C3XRP0_BRAFL	Uncharacterized protein. (2342 aa)
	C3XX89_BRAFL	Uncharacterized protein. (781 aa)
	C3XZ04_BRAFL	Uncharacterized protein. (358 aa)
	C3Y0V4_BRAFL	ERCC4 domain-containing protein. (268 aa)
	C3Y0V8_BRAFL	ERCC4 domain-containing protein. (600 aa)
	C3Y0V9_BRAFL	Uncharacterized protein. (343 aa)
	C3Y3U3_BRAFL	Lactamase_B domain-containing protein. (377 aa)
	C3Y8J6_BRAFL	NTF2 domain-containing protein. (124 aa)
	C3Y937_BRAFL	Uncharacterized protein. (427 aa)
	C3YBR2_BRAFL	Uncharacterized protein. (478 aa)
	C3YIZ2_BRAFL	Uncharacterized protein. (915 aa)
	C3YIZ5_BRAFL	FANCI_S1 domain-containing protein. (212 aa)
	C3YJ93_BRAFL	Uncharacterized protein. (915 aa)
	C3YKN6_BRAFL	WD_REPEATS_REGION domain-containing protein. (665 aa)
	C3YLB2_BRAFL	Uncharacterized protein. (897 aa)
	C3YM01_BRAFL	Uncharacterized protein. (566 aa)
	C3YNI7_BRAFL	Uncharacterized protein. (1175 aa)
	C3YQX9_BRAFL	XPA_C domain-containing protein. (259 aa)
	C3Z419_BRAFL	GIY-YIG domain-containing protein. (155 aa)
	C3Z6T3_BRAFL	USP domain-containing protein. (892 aa)
	C3Z6W7_BRAFL	ERCC4 domain-containing protein. (598 aa)
	C3Z943_BRAFL	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (104 aa)
	C3ZNW9_BRAFL	ERCC4 domain-containing protein. (515 aa)
	C3ZNX8_BRAFL	Uncharacterized protein. (233 aa)
	C3ZVQ8_BRAFL	UBZ_FAAP20 domain-containing protein. (583 aa)
	C4A088_BRAFL	BTB domain-containing protein. (2428 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XPP2_BRAFL	C3XRP0_BRAFL	C3XPP2	C3XRP0	Uncharacterized protein.	Uncharacterized protein.	0.952
C3XPP2_BRAFL	C3XX89_BRAFL	C3XPP2	C3XX89	Uncharacterized protein.	Uncharacterized protein.	0.960
C3XPP2_BRAFL	C3XZ04_BRAFL	C3XPP2	C3XZ04	Uncharacterized protein.	Uncharacterized protein.	0.949
C3XPP2_BRAFL	C3Y8J6_BRAFL	C3XPP2	C3Y8J6	Uncharacterized protein.	NTF2 domain-containing protein.	0.689
C3XPP2_BRAFL	C3Y937_BRAFL	C3XPP2	C3Y937	Uncharacterized protein.	Uncharacterized protein.	0.452
C3XPP2_BRAFL	C3YIZ2_BRAFL	C3XPP2	C3YIZ2	Uncharacterized protein.	Uncharacterized protein.	0.478
C3XPP2_BRAFL	C3YJ93_BRAFL	C3XPP2	C3YJ93	Uncharacterized protein.	Uncharacterized protein.	0.478
C3XPP2_BRAFL	C3YLB2_BRAFL	C3XPP2	C3YLB2	Uncharacterized protein.	Uncharacterized protein.	0.850
C3XPP2_BRAFL	C3YM01_BRAFL	C3XPP2	C3YM01	Uncharacterized protein.	Uncharacterized protein.	0.950
C3XPP2_BRAFL	C3YNI7_BRAFL	C3XPP2	C3YNI7	Uncharacterized protein.	Uncharacterized protein.	0.624
C3XPP2_BRAFL	C3Z943_BRAFL	C3XPP2	C3Z943	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.551
C3XPP2_BRAFL	C3ZNW9_BRAFL	C3XPP2	C3ZNW9	Uncharacterized protein.	ERCC4 domain-containing protein.	0.473
C3XPP2_BRAFL	C3ZNX8_BRAFL	C3XPP2	C3ZNX8	Uncharacterized protein.	Uncharacterized protein.	0.473
C3XPP2_BRAFL	C3ZVQ8_BRAFL	C3XPP2	C3ZVQ8	Uncharacterized protein.	UBZ_FAAP20 domain-containing protein.	0.698
C3XPU5_BRAFL	C3XRP0_BRAFL	C3XPU5	C3XRP0	ERCC4 domain-containing protein.	Uncharacterized protein.	0.964
C3XPU5_BRAFL	C3XX89_BRAFL	C3XPU5	C3XX89	ERCC4 domain-containing protein.	Uncharacterized protein.	0.651
C3XPU5_BRAFL	C3XZ04_BRAFL	C3XPU5	C3XZ04	ERCC4 domain-containing protein.	Uncharacterized protein.	0.659
C3XPU5_BRAFL	C3Y0V4_BRAFL	C3XPU5	C3Y0V4	ERCC4 domain-containing protein.	ERCC4 domain-containing protein.	0.540
C3XPU5_BRAFL	C3Y0V8_BRAFL	C3XPU5	C3Y0V8	ERCC4 domain-containing protein.	ERCC4 domain-containing protein.	0.540
C3XPU5_BRAFL	C3Y0V9_BRAFL	C3XPU5	C3Y0V9	ERCC4 domain-containing protein.	Uncharacterized protein.	0.540