(5 nodes) Cobalamin (Cbl) metabolism network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XSJ5_BRAFL	Uncharacterized protein. (699 aa)
	C3YA22_BRAFL	Uncharacterized protein. (184 aa)
	C3YH00_BRAFL	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1318 aa)
	C3YW38_BRAFL	Uncharacterized protein. (299 aa)
	C3ZD62_BRAFL	Uncharacterized protein. (507 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XSJ5_BRAFL	C3YA22_BRAFL	C3XSJ5	C3YA22	Uncharacterized protein.	Uncharacterized protein.	0.808
C3XSJ5_BRAFL	C3YH00_BRAFL	C3XSJ5	C3YH00	Uncharacterized protein.	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	0.933
C3XSJ5_BRAFL	C3YW38_BRAFL	C3XSJ5	C3YW38	Uncharacterized protein.	Uncharacterized protein.	0.886
C3XSJ5_BRAFL	C3ZD62_BRAFL	C3XSJ5	C3ZD62	Uncharacterized protein.	Uncharacterized protein.	0.538
C3YA22_BRAFL	C3XSJ5_BRAFL	C3YA22	C3XSJ5	Uncharacterized protein.	Uncharacterized protein.	0.808
C3YA22_BRAFL	C3YH00_BRAFL	C3YA22	C3YH00	Uncharacterized protein.	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	0.809
C3YA22_BRAFL	C3YW38_BRAFL	C3YA22	C3YW38	Uncharacterized protein.	Uncharacterized protein.	0.862
C3YA22_BRAFL	C3ZD62_BRAFL	C3YA22	C3ZD62	Uncharacterized protein.	Uncharacterized protein.	0.584
C3YH00_BRAFL	C3XSJ5_BRAFL	C3YH00	C3XSJ5	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	Uncharacterized protein.	0.933
C3YH00_BRAFL	C3YA22_BRAFL	C3YH00	C3YA22	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	Uncharacterized protein.	0.809
C3YH00_BRAFL	C3YW38_BRAFL	C3YH00	C3YW38	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	Uncharacterized protein.	0.886
C3YH00_BRAFL	C3ZD62_BRAFL	C3YH00	C3ZD62	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	Uncharacterized protein.	0.563
C3YW38_BRAFL	C3XSJ5_BRAFL	C3YW38	C3XSJ5	Uncharacterized protein.	Uncharacterized protein.	0.886
C3YW38_BRAFL	C3YA22_BRAFL	C3YW38	C3YA22	Uncharacterized protein.	Uncharacterized protein.	0.862
C3YW38_BRAFL	C3YH00_BRAFL	C3YW38	C3YH00	Uncharacterized protein.	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	0.886
C3YW38_BRAFL	C3ZD62_BRAFL	C3YW38	C3ZD62	Uncharacterized protein.	Uncharacterized protein.	0.702
C3ZD62_BRAFL	C3XSJ5_BRAFL	C3ZD62	C3XSJ5	Uncharacterized protein.	Uncharacterized protein.	0.538
C3ZD62_BRAFL	C3YA22_BRAFL	C3ZD62	C3YA22	Uncharacterized protein.	Uncharacterized protein.	0.584
C3ZD62_BRAFL	C3YH00_BRAFL	C3ZD62	C3YH00	Uncharacterized protein.	Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.	0.563
C3ZD62_BRAFL	C3YW38_BRAFL	C3ZD62	C3YW38	Uncharacterized protein.	Uncharacterized protein.	0.702