22 items (Branchiostoma floridae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XQI4_BRAFL	Uncharacterized protein. (1027 aa)
	C3XUE1_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (230 aa)
	C3XV43_BRAFL	Uncharacterized protein. (602 aa)
	C3XY99_BRAFL	Thioredoxin domain-containing protein. (219 aa)
	C3XYS7_BRAFL	Uncharacterized protein. (207 aa)
	C3XZW1_BRAFL	Uncharacterized protein. (202 aa)
	C3Y034_BRAFL	Uncharacterized protein. (201 aa)
	C3Y036_BRAFL	Uncharacterized protein. (197 aa)
	C3Y038_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (197 aa)
	C3YCQ4_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (224 aa)
	C3YI21_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (220 aa)
	C3YTZ0_BRAFL	Thioredoxin domain-containing protein. (222 aa)
	C3YTZ1_BRAFL	Thioredoxin domain-containing protein. (222 aa)
	C3Z0L4_BRAFL	Uncharacterized protein. (196 aa)
	C3Z147_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (237 aa)
	C3Z5F2_BRAFL	GST N-terminal domain-containing protein. (194 aa)
	C3Z5J1_BRAFL	Uncharacterized protein. (228 aa)
	C3Z5J2_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (212 aa)
	C3ZEM8_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (218 aa)
	C3ZM48_BRAFL	Uncharacterized protein. (220 aa)
	C3ZRU1_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (239 aa)
	C3ZRU5_BRAFL	Uncharacterized protein; Belongs to the GST superfamily. (214 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQI4_BRAFL	C3XUE1_BRAFL	C3XQI4	C3XUE1	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.686
C3XQI4_BRAFL	C3XV43_BRAFL	C3XQI4	C3XV43	Uncharacterized protein.	Uncharacterized protein.	0.692
C3XQI4_BRAFL	C3XY99_BRAFL	C3XQI4	C3XY99	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.742
C3XQI4_BRAFL	C3XYS7_BRAFL	C3XQI4	C3XYS7	Uncharacterized protein.	Uncharacterized protein.	0.650
C3XQI4_BRAFL	C3XZW1_BRAFL	C3XQI4	C3XZW1	Uncharacterized protein.	Uncharacterized protein.	0.650
C3XQI4_BRAFL	C3Y034_BRAFL	C3XQI4	C3Y034	Uncharacterized protein.	Uncharacterized protein.	0.650
C3XQI4_BRAFL	C3Y036_BRAFL	C3XQI4	C3Y036	Uncharacterized protein.	Uncharacterized protein.	0.650
C3XQI4_BRAFL	C3Y038_BRAFL	C3XQI4	C3Y038	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.650
C3XQI4_BRAFL	C3YCQ4_BRAFL	C3XQI4	C3YCQ4	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.716
C3XQI4_BRAFL	C3YI21_BRAFL	C3XQI4	C3YI21	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.724
C3XQI4_BRAFL	C3YTZ0_BRAFL	C3XQI4	C3YTZ0	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.742
C3XQI4_BRAFL	C3YTZ1_BRAFL	C3XQI4	C3YTZ1	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.742
C3XQI4_BRAFL	C3Z0L4_BRAFL	C3XQI4	C3Z0L4	Uncharacterized protein.	Uncharacterized protein.	0.722
C3XQI4_BRAFL	C3Z147_BRAFL	C3XQI4	C3Z147	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.709
C3XQI4_BRAFL	C3Z5F2_BRAFL	C3XQI4	C3Z5F2	Uncharacterized protein.	GST N-terminal domain-containing protein.	0.650
C3XQI4_BRAFL	C3Z5J1_BRAFL	C3XQI4	C3Z5J1	Uncharacterized protein.	Uncharacterized protein.	0.716
C3XQI4_BRAFL	C3Z5J2_BRAFL	C3XQI4	C3Z5J2	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.716
C3XQI4_BRAFL	C3ZEM8_BRAFL	C3XQI4	C3ZEM8	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.722
C3XQI4_BRAFL	C3ZM48_BRAFL	C3XQI4	C3ZM48	Uncharacterized protein.	Uncharacterized protein.	0.724
C3XQI4_BRAFL	C3ZRU1_BRAFL	C3XQI4	C3ZRU1	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.709