(7 nodes) Nonhomologous end joining complex network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YF62_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (311 aa)
	C3YF64_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (4388 aa)
	C3YF65_BRAFL	Uncharacterized protein. (488 aa)
	C3YPJ3_BRAFL	DRMBL domain-containing protein. (387 aa)
	C3YZ01_BRAFL	DNA ligase. (793 aa)
	C3Z1F8_BRAFL	Ku domain-containing protein. (613 aa)
	C3ZSM7_BRAFL	Ku domain-containing protein. (716 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3YF62_BRAFL	C3YF64_BRAFL	C3YF62	C3YF64	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.947
C3YF62_BRAFL	C3YF65_BRAFL	C3YF62	C3YF65	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.934
C3YF62_BRAFL	C3YPJ3_BRAFL	C3YF62	C3YPJ3	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	DRMBL domain-containing protein.	0.956
C3YF62_BRAFL	C3YZ01_BRAFL	C3YF62	C3YZ01	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	DNA ligase.	0.862
C3YF62_BRAFL	C3Z1F8_BRAFL	C3YF62	C3Z1F8	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Ku domain-containing protein.	0.957
C3YF62_BRAFL	C3ZSM7_BRAFL	C3YF62	C3ZSM7	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Ku domain-containing protein.	0.963
C3YF64_BRAFL	C3YF62_BRAFL	C3YF64	C3YF62	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.947
C3YF64_BRAFL	C3YF65_BRAFL	C3YF64	C3YF65	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.942
C3YF64_BRAFL	C3YPJ3_BRAFL	C3YF64	C3YPJ3	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	DRMBL domain-containing protein.	0.956
C3YF64_BRAFL	C3YZ01_BRAFL	C3YF64	C3YZ01	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	DNA ligase.	0.862
C3YF64_BRAFL	C3Z1F8_BRAFL	C3YF64	C3Z1F8	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Ku domain-containing protein.	0.957
C3YF64_BRAFL	C3ZSM7_BRAFL	C3YF64	C3ZSM7	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Ku domain-containing protein.	0.963
C3YF65_BRAFL	C3YF62_BRAFL	C3YF65	C3YF62	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.934
C3YF65_BRAFL	C3YF64_BRAFL	C3YF65	C3YF64	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.942
C3YF65_BRAFL	C3YPJ3_BRAFL	C3YF65	C3YPJ3	Uncharacterized protein.	DRMBL domain-containing protein.	0.930
C3YF65_BRAFL	C3YZ01_BRAFL	C3YF65	C3YZ01	Uncharacterized protein.	DNA ligase.	0.788
C3YF65_BRAFL	C3Z1F8_BRAFL	C3YF65	C3Z1F8	Uncharacterized protein.	Ku domain-containing protein.	0.937
C3YF65_BRAFL	C3ZSM7_BRAFL	C3YF65	C3ZSM7	Uncharacterized protein.	Ku domain-containing protein.	0.940
C3YPJ3_BRAFL	C3YF62_BRAFL	C3YPJ3	C3YF62	DRMBL domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.956
C3YPJ3_BRAFL	C3YF64_BRAFL	C3YPJ3	C3YF64	DRMBL domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.956