10 items (Branchiostoma floridae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Y0N3_BRAFL	WH1 domain-containing protein. (536 aa)
	C3Y2M9_BRAFL	Uncharacterized protein. (1333 aa)
	C3Y7J2_BRAFL	Uncharacterized protein. (687 aa)
	C3YF58_BRAFL	Uncharacterized protein. (386 aa)
	C3ZF12_BRAFL	Uncharacterized protein. (907 aa)
	C3ZGU2_BRAFL	Uncharacterized protein. (865 aa)
	C3ZH14_BRAFL	Uncharacterized protein. (1202 aa)
	C3ZH15_BRAFL	Uncharacterized protein. (259 aa)
	C3ZV77_BRAFL	Ras-GAP domain-containing protein. (1311 aa)
	C3ZV81_BRAFL	CRAL-TRIO domain-containing protein. (1389 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3Y0N3_BRAFL	C3Y2M9_BRAFL	C3Y0N3	C3Y2M9	WH1 domain-containing protein.	Uncharacterized protein.	0.532
C3Y0N3_BRAFL	C3Y7J2_BRAFL	C3Y0N3	C3Y7J2	WH1 domain-containing protein.	Uncharacterized protein.	0.644
C3Y0N3_BRAFL	C3YF58_BRAFL	C3Y0N3	C3YF58	WH1 domain-containing protein.	Uncharacterized protein.	0.443
C3Y0N3_BRAFL	C3ZF12_BRAFL	C3Y0N3	C3ZF12	WH1 domain-containing protein.	Uncharacterized protein.	0.519
C3Y0N3_BRAFL	C3ZGU2_BRAFL	C3Y0N3	C3ZGU2	WH1 domain-containing protein.	Uncharacterized protein.	0.622
C3Y0N3_BRAFL	C3ZV77_BRAFL	C3Y0N3	C3ZV77	WH1 domain-containing protein.	Ras-GAP domain-containing protein.	0.907
C3Y0N3_BRAFL	C3ZV81_BRAFL	C3Y0N3	C3ZV81	WH1 domain-containing protein.	CRAL-TRIO domain-containing protein.	0.907
C3Y2M9_BRAFL	C3Y0N3_BRAFL	C3Y2M9	C3Y0N3	Uncharacterized protein.	WH1 domain-containing protein.	0.532
C3Y2M9_BRAFL	C3Y7J2_BRAFL	C3Y2M9	C3Y7J2	Uncharacterized protein.	Uncharacterized protein.	0.583
C3Y2M9_BRAFL	C3YF58_BRAFL	C3Y2M9	C3YF58	Uncharacterized protein.	Uncharacterized protein.	0.468
C3Y2M9_BRAFL	C3ZF12_BRAFL	C3Y2M9	C3ZF12	Uncharacterized protein.	Uncharacterized protein.	0.672
C3Y2M9_BRAFL	C3ZGU2_BRAFL	C3Y2M9	C3ZGU2	Uncharacterized protein.	Uncharacterized protein.	0.757
C3Y2M9_BRAFL	C3ZH14_BRAFL	C3Y2M9	C3ZH14	Uncharacterized protein.	Uncharacterized protein.	0.700
C3Y2M9_BRAFL	C3ZH15_BRAFL	C3Y2M9	C3ZH15	Uncharacterized protein.	Uncharacterized protein.	0.700
C3Y2M9_BRAFL	C3ZV77_BRAFL	C3Y2M9	C3ZV77	Uncharacterized protein.	Ras-GAP domain-containing protein.	0.528
C3Y2M9_BRAFL	C3ZV81_BRAFL	C3Y2M9	C3ZV81	Uncharacterized protein.	CRAL-TRIO domain-containing protein.	0.528
C3Y7J2_BRAFL	C3Y0N3_BRAFL	C3Y7J2	C3Y0N3	Uncharacterized protein.	WH1 domain-containing protein.	0.644
C3Y7J2_BRAFL	C3Y2M9_BRAFL	C3Y7J2	C3Y2M9	Uncharacterized protein.	Uncharacterized protein.	0.583
C3Y7J2_BRAFL	C3ZF12_BRAFL	C3Y7J2	C3ZF12	Uncharacterized protein.	Uncharacterized protein.	0.581
C3Y7J2_BRAFL	C3ZGU2_BRAFL	C3Y7J2	C3ZGU2	Uncharacterized protein.	Uncharacterized protein.	0.767