(12 nodes) Target SNARE coiled-coil homology domain, and NSF attachment protein network (Branchiostoma floridae)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XQ82_BRAFL	V-SNARE coiled-coil homology domain-containing protein. (125 aa)
	C3XR60_BRAFL	Uncharacterized protein. (294 aa)
	C3XS03_BRAFL	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (210 aa)
	C3XVK8_BRAFL	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (210 aa)
	C3XZI6_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (239 aa)
	C3YC85_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (217 aa)
	C3YCL6_BRAFL	TPR_REGION domain-containing protein. (323 aa)
	C3YZ18_BRAFL	Uncharacterized protein. (780 aa)
	C3Z5P8_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (196 aa)
	C3ZAU4_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (318 aa)
	C3ZG74_BRAFL	t-SNARE coiled-coil homology domain-containing protein. (232 aa)
	C3ZP65_BRAFL	V-SNARE coiled-coil homology domain-containing protein. (114 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQ82_BRAFL	C3XR60_BRAFL	C3XQ82	C3XR60	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.997
C3XQ82_BRAFL	C3XS03_BRAFL	C3XQ82	C3XS03	V-SNARE coiled-coil homology domain-containing protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.984
C3XQ82_BRAFL	C3XVK8_BRAFL	C3XQ82	C3XVK8	V-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.996
C3XQ82_BRAFL	C3XZI6_BRAFL	C3XQ82	C3XZI6	V-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.942
C3XQ82_BRAFL	C3YC85_BRAFL	C3XQ82	C3YC85	V-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.944
C3XQ82_BRAFL	C3YCL6_BRAFL	C3XQ82	C3YCL6	V-SNARE coiled-coil homology domain-containing protein.	TPR_REGION domain-containing protein.	0.871
C3XQ82_BRAFL	C3YZ18_BRAFL	C3XQ82	C3YZ18	V-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.945
C3XQ82_BRAFL	C3Z5P8_BRAFL	C3XQ82	C3Z5P8	V-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.961
C3XQ82_BRAFL	C3ZAU4_BRAFL	C3XQ82	C3ZAU4	V-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.944
C3XQ82_BRAFL	C3ZG74_BRAFL	C3XQ82	C3ZG74	V-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.965
C3XQ82_BRAFL	C3ZP65_BRAFL	C3XQ82	C3ZP65	V-SNARE coiled-coil homology domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.936
C3XR60_BRAFL	C3XQ82_BRAFL	C3XR60	C3XQ82	Uncharacterized protein.	V-SNARE coiled-coil homology domain-containing protein.	0.997
C3XR60_BRAFL	C3XS03_BRAFL	C3XR60	C3XS03	Uncharacterized protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.954
C3XR60_BRAFL	C3XVK8_BRAFL	C3XR60	C3XVK8	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.986
C3XR60_BRAFL	C3XZI6_BRAFL	C3XR60	C3XZI6	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.986
C3XR60_BRAFL	C3YC85_BRAFL	C3XR60	C3YC85	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.982
C3XR60_BRAFL	C3YCL6_BRAFL	C3XR60	C3YCL6	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.970
C3XR60_BRAFL	C3YZ18_BRAFL	C3XR60	C3YZ18	Uncharacterized protein.	Uncharacterized protein.	0.995
C3XR60_BRAFL	C3Z5P8_BRAFL	C3XR60	C3Z5P8	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.999
C3XR60_BRAFL	C3ZAU4_BRAFL	C3XR60	C3ZAU4	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.990