(28 nodes) Mixed, incl. Cohesin Loading onto Chromatin, and Smc5-Smc6 complex network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XQP2_BRAFL	MAGE domain-containing protein. (215 aa)
	C3XQS0_BRAFL	Uncharacterized protein. (142 aa)
	C3XWA0_BRAFL	Uncharacterized protein. (1435 aa)
	C3XZX7_BRAFL	WAPL domain-containing protein. (1304 aa)
	C3Y1B9_BRAFL	zf-RING-like domain-containing protein. (281 aa)
	C3Y1G8_BRAFL	Uncharacterized protein. (540 aa)
	C3Y1S5_BRAFL	SMC_N domain-containing protein. (1096 aa)
	C3Y4B4_BRAFL	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (524 aa)
	C3YJJ7_BRAFL	SCD domain-containing protein. (965 aa)
	C3YJL1_BRAFL	SCD domain-containing protein. (987 aa)
	C3YK34_BRAFL	Uncharacterized protein. (2326 aa)
	C3YKL1_BRAFL	AlbA_2 domain-containing protein. (1649 aa)
	C3YMQ0_BRAFL	SP-RING-type domain-containing protein. (252 aa)
	C3YMX6_BRAFL	Rad21_Rec8_N domain-containing protein. (422 aa)
	C3YN01_BRAFL	Uncharacterized protein. (251 aa)
	C3YT69_BRAFL	Uncharacterized protein. (143 aa)
	C3YVN5_BRAFL	Uncharacterized protein. (209 aa)
	C3YYD7_BRAFL	Uncharacterized protein. (290 aa)
	C3Z465_BRAFL	Uncharacterized protein. (164 aa)
	C3Z9I6_BRAFL	Uncharacterized protein. (643 aa)
	C3ZD70_BRAFL	Uncharacterized protein. (287 aa)
	C3ZK37_BRAFL	Uncharacterized protein. (103 aa)
	C3ZMN0_BRAFL	Uncharacterized protein. (249 aa)
	C3ZS00_BRAFL	SMC_N domain-containing protein. (1059 aa)
	C3ZVX7_BRAFL	Nipped-B protein. (1493 aa)
	C3ZWG8_BRAFL	Uncharacterized protein. (965 aa)
	C3ZXG6_BRAFL	Uncharacterized protein. (226 aa)
	C3ZZ02_BRAFL	Uncharacterized protein. (98 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQP2_BRAFL	C3Y1B9_BRAFL	C3XQP2	C3Y1B9	MAGE domain-containing protein.	zf-RING-like domain-containing protein.	0.998
C3XQP2_BRAFL	C3Y1S5_BRAFL	C3XQP2	C3Y1S5	MAGE domain-containing protein.	SMC_N domain-containing protein.	0.997
C3XQP2_BRAFL	C3Y4B4_BRAFL	C3XQP2	C3Y4B4	MAGE domain-containing protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.998
C3XQP2_BRAFL	C3YMQ0_BRAFL	C3XQP2	C3YMQ0	MAGE domain-containing protein.	SP-RING-type domain-containing protein.	0.995
C3XQP2_BRAFL	C3YMX6_BRAFL	C3XQP2	C3YMX6	MAGE domain-containing protein.	Rad21_Rec8_N domain-containing protein.	0.644
C3XQP2_BRAFL	C3Z465_BRAFL	C3XQP2	C3Z465	MAGE domain-containing protein.	Uncharacterized protein.	0.511
C3XQP2_BRAFL	C3ZS00_BRAFL	C3XQP2	C3ZS00	MAGE domain-containing protein.	SMC_N domain-containing protein.	0.997
C3XQS0_BRAFL	C3Y1B9_BRAFL	C3XQS0	C3Y1B9	Uncharacterized protein.	zf-RING-like domain-containing protein.	0.701
C3XQS0_BRAFL	C3Y1S5_BRAFL	C3XQS0	C3Y1S5	Uncharacterized protein.	SMC_N domain-containing protein.	0.696
C3XQS0_BRAFL	C3Y4B4_BRAFL	C3XQS0	C3Y4B4	Uncharacterized protein.	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.	0.708
C3XQS0_BRAFL	C3YMQ0_BRAFL	C3XQS0	C3YMQ0	Uncharacterized protein.	SP-RING-type domain-containing protein.	0.693
C3XQS0_BRAFL	C3Z465_BRAFL	C3XQS0	C3Z465	Uncharacterized protein.	Uncharacterized protein.	0.511
C3XQS0_BRAFL	C3ZS00_BRAFL	C3XQS0	C3ZS00	Uncharacterized protein.	SMC_N domain-containing protein.	0.694
C3XWA0_BRAFL	C3XZX7_BRAFL	C3XWA0	C3XZX7	Uncharacterized protein.	WAPL domain-containing protein.	0.991
C3XWA0_BRAFL	C3Y1G8_BRAFL	C3XWA0	C3Y1G8	Uncharacterized protein.	Uncharacterized protein.	0.862
C3XWA0_BRAFL	C3Y1S5_BRAFL	C3XWA0	C3Y1S5	Uncharacterized protein.	SMC_N domain-containing protein.	0.912
C3XWA0_BRAFL	C3YJJ7_BRAFL	C3XWA0	C3YJJ7	Uncharacterized protein.	SCD domain-containing protein.	0.977
C3XWA0_BRAFL	C3YJL1_BRAFL	C3XWA0	C3YJL1	Uncharacterized protein.	SCD domain-containing protein.	0.977
C3XWA0_BRAFL	C3YKL1_BRAFL	C3XWA0	C3YKL1	Uncharacterized protein.	AlbA_2 domain-containing protein.	0.869
C3XWA0_BRAFL	C3YMX6_BRAFL	C3XWA0	C3YMX6	Uncharacterized protein.	Rad21_Rec8_N domain-containing protein.	0.999