(122 nodes) Mixed, incl. RAB geranylgeranylation, and Vesicle tethering complex network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XQH0_BRAFL	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (332 aa)
	C3XU08_BRAFL	Rab-GAP TBC domain-containing protein. (404 aa)
	C3XUC7_BRAFL	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. (920 aa)
	C3XVD6_BRAFL	G domain-containing protein. (450 aa)
	C3XVH7_BRAFL	VPS9 domain-containing protein. (447 aa)
	C3XVT2_BRAFL	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (575 aa)
	C3XVZ5_BRAFL	CNH domain-containing protein. (863 aa)
	C3XXM3_BRAFL	Pep3_Vps18 domain-containing protein. (986 aa)
	C3XZC9_BRAFL	Uncharacterized protein. (207 aa)
	C3XZG3_BRAFL	Rab-GAP TBC domain-containing protein. (493 aa)
	C3Y0H3_BRAFL	VPS9 domain-containing protein. (329 aa)
	C3Y0H6_BRAFL	Uncharacterized protein. (168 aa)
	C3Y0N2_BRAFL	Uncharacterized protein. (669 aa)
	C3Y0W6_BRAFL	Uncharacterized protein. (709 aa)
	C3Y1S4_BRAFL	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (571 aa)
	C3Y2H0_BRAFL	PH_RBD domain-containing protein. (172 aa)
	C3Y2H3_BRAFL	Rab-GAP TBC domain-containing protein. (445 aa)
	C3Y2J5_BRAFL	PID domain-containing protein. (363 aa)
	C3Y2J6_BRAFL	DUF3694 domain-containing protein. (236 aa)
	C3Y2J7_BRAFL	Uncharacterized protein. (729 aa)
	C3Y2T1_BRAFL	Uncharacterized protein. (359 aa)
	C3Y2T2_BRAFL	Uncharacterized protein. (340 aa)
	C3Y2T3_BRAFL	Uncharacterized protein. (347 aa)
	C3Y362_BRAFL	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (2036 aa)
	C3Y3L2_BRAFL	Uncharacterized protein. (612 aa)
	C3Y3T2_BRAFL	Uncharacterized protein. (509 aa)
	C3Y491_BRAFL	Uncharacterized protein. (167 aa)
	C3Y4D1_BRAFL	Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. (804 aa)
	C3Y7P8_BRAFL	Sec2p domain-containing protein. (332 aa)
	C3Y8C0_BRAFL	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (647 aa)
	C3Y8H3_BRAFL	Uncharacterized protein. (180 aa)
	C3Y8M1_BRAFL	RabGGT_insert domain-containing protein. (566 aa)
	C3Y922_BRAFL	Uncharacterized protein. (546 aa)
	C3Y9B1_BRAFL	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (655 aa)
	C3YA80_BRAFL	Uncharacterized protein. (144 aa)
	C3YBJ5_BRAFL	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the metallo-dependent hydrolases superfamily. Phosphotriesterase family. (1050 aa)
	C3YCU0_BRAFL	Uncharacterized protein. (1654 aa)
	C3YDX8_BRAFL	Uncharacterized protein. (217 aa)
	C3YEP6_BRAFL	Uncharacterized protein. (182 aa)
	C3YFN5_BRAFL	VPS9 domain-containing protein. (529 aa)
	C3YIM0_BRAFL	ALMS_motif domain-containing protein. (2857 aa)
	C3YJ14_BRAFL	Sec8_exocyst domain-containing protein. (748 aa)
	C3YKI2_BRAFL	Ig-like domain-containing protein. (703 aa)
	C3YKV1_BRAFL	RING-type domain-containing protein. (894 aa)
	C3YLH1_BRAFL	Uncharacterized protein. (425 aa)
	C3YLR1_BRAFL	Uncharacterized protein. (188 aa)
	C3YMP9_BRAFL	Uncharacterized protein. (1097 aa)
	C3YNQ4_BRAFL	Uncharacterized protein. (208 aa)
	C3YNQ8_BRAFL	Uncharacterized protein. (263 aa)
	C3YPL0_BRAFL	Uncharacterized protein. (519 aa)
	Emxa.1	Rab-GAP TBC domain-containing protein. (621 aa)
	C3YRF8_BRAFL	Uncharacterized protein. (224 aa)
	C3YRQ1_BRAFL	Uncharacterized protein. (231 aa)
	C3YRV4_BRAFL	Uncharacterized protein. (198 aa)
	C3YSA6_BRAFL	Uncharacterized protein. (1187 aa)
	C3YSJ0_BRAFL	Uncharacterized protein. (747 aa)
	C3YV50_BRAFL	Uncharacterized protein. (208 aa)
	C3YV62_BRAFL	Uncharacterized protein. (197 aa)
	C3YV74_BRAFL	Uncharacterized protein. (203 aa)
	C3YV76_BRAFL	Uncharacterized protein. (203 aa)
	C3YVD5_BRAFL	Uncharacterized protein. (749 aa)
	C3YVW2_BRAFL	Uncharacterized protein. (603 aa)
	C3YW66_BRAFL	Ras-related protein rab-9a. (180 aa)
	C3YWJ9_BRAFL	FIP-RBD domain-containing protein. (344 aa)
	C3YX87_BRAFL	Uncharacterized protein. (219 aa)
	C3YXH4_BRAFL	Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (761 aa)
	C3YYJ2_BRAFL	Uncharacterized protein. (213 aa)
	C3YZ95_BRAFL	Uncharacterized protein. (737 aa)
	C3Z0Q8_BRAFL	Uncharacterized protein. (1243 aa)
	C3Z0Q9_BRAFL	EF-hand domain-containing protein. (130 aa)
	C3Z2C8_BRAFL	Uncharacterized protein. (204 aa)
	C3Z4E2_BRAFL	Rab-GAP TBC domain-containing protein. (226 aa)
	C3Z5Z5_BRAFL	Uncharacterized protein. (764 aa)
	C3Z6B5_BRAFL	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (171 aa)
	C3Z6B6_BRAFL	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (387 aa)
	C3Z6G9_BRAFL	BMERB domain-containing protein. (191 aa)
	C3Z6Q6_BRAFL	Uncharacterized protein. (336 aa)
	C3Z6Q9_BRAFL	Uncharacterized protein. (466 aa)
	C3Z792_BRAFL	Uncharacterized protein. (4526 aa)
	C3Z7N9_BRAFL	Rab-GAP TBC domain-containing protein. (913 aa)
	C3Z8X6_BRAFL	Uncharacterized protein. (271 aa)
	C3Z904_BRAFL	Uncharacterized protein. (205 aa)
	C3Z921_BRAFL	Uncharacterized protein. (101 aa)
	C3ZAA4_BRAFL	Uncharacterized protein. (514 aa)
	C3ZAA5_BRAFL	Uncharacterized protein. (290 aa)
	C3ZAR0_BRAFL	Uncharacterized protein. (765 aa)
	C3ZC01_BRAFL	Uncharacterized protein. (164 aa)
	C3ZC71_BRAFL	Uncharacterized protein. (163 aa)
	C3ZCR6_BRAFL	Uncharacterized protein. (185 aa)
	C3ZCT0_BRAFL	CABIT domain-containing protein. (728 aa)
	C3ZD48_BRAFL	CABIT domain-containing protein. (431 aa)
	C3ZD49_BRAFL	CABIT domain-containing protein. (637 aa)
	C3ZD51_BRAFL	CABIT domain-containing protein. (386 aa)
	C3ZD52_BRAFL	CABIT domain-containing protein. (614 aa)
	C3ZD55_BRAFL	CABIT domain-containing protein. (795 aa)
	C3ZEP3_BRAFL	Uncharacterized protein. (340 aa)
	C3ZFG7_BRAFL	Uncharacterized protein. (211 aa)
	C3ZGN7_BRAFL	PKD_channel domain-containing protein. (302 aa)
	C3ZHV5_BRAFL	Rabaptin domain-containing protein. (163 aa)
	C3ZHV6_BRAFL	Uncharacterized protein. (494 aa)
	C3ZIQ9_BRAFL	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (751 aa)
	C3ZIU1_BRAFL	Rab-GAP TBC domain-containing protein. (343 aa)
	C3ZIV3_BRAFL	Uncharacterized protein; Belongs to the metallo-dependent hydrolases superfamily. Phosphotriesterase family. (325 aa)
	C3ZIW0_BRAFL	Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (795 aa)
	C3ZJE1_BRAFL	Uncharacterized protein. (142 aa)
	C3ZKQ5_BRAFL	Vps16_C domain-containing protein. (176 aa)
	C3ZLU5_BRAFL	PH domain-containing protein. (629 aa)
	C3ZNC5_BRAFL	Uncharacterized protein. (341 aa)
	C3ZNK3_BRAFL	Uncharacterized protein. (202 aa)
	C3ZPR0_BRAFL	Rab-GAP TBC domain-containing protein. (359 aa)
	C3ZRX8_BRAFL	Uncharacterized protein. (203 aa)
	C3ZTG4_BRAFL	Uncharacterized protein. (215 aa)
	C3ZUF5_BRAFL	Sec3_C domain-containing protein. (777 aa)
	C3ZUF6_BRAFL	Sec3-PIP2_bind domain-containing protein. (758 aa)
	C3ZUU8_BRAFL	RING-type domain-containing protein. (212 aa)
	C3ZUZ9_BRAFL	C2 domain-containing protein. (76 aa)
	C3ZW44_BRAFL	Uncharacterized protein. (172 aa)
	C3ZX45_BRAFL	Uncharacterized protein. (208 aa)
	C3ZXJ3_BRAFL	Uncharacterized protein. (320 aa)
	C3ZXT6_BRAFL	Uncharacterized protein. (162 aa)
	C3ZYQ6_BRAFL	RING-type domain-containing protein. (316 aa)
	rab-GDI	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (446 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XQH0_BRAFL	C3XZC9_BRAFL	C3XQH0	C3XZC9	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.716
C3XQH0_BRAFL	C3Y0H6_BRAFL	C3XQH0	C3Y0H6	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.467
C3XQH0_BRAFL	C3Y3L2_BRAFL	C3XQH0	C3Y3L2	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.528
C3XQH0_BRAFL	C3Y3T2_BRAFL	C3XQH0	C3Y3T2	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.464
C3XQH0_BRAFL	C3Y491_BRAFL	C3XQH0	C3Y491	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.525
C3XQH0_BRAFL	C3Y8H3_BRAFL	C3XQH0	C3Y8H3	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.580
C3XQH0_BRAFL	C3Y8M1_BRAFL	C3XQH0	C3Y8M1	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	RabGGT_insert domain-containing protein.	0.999
C3XQH0_BRAFL	C3YCU0_BRAFL	C3XQH0	C3YCU0	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.632
C3XQH0_BRAFL	C3YDX8_BRAFL	C3XQH0	C3YDX8	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.665
C3XQH0_BRAFL	C3YEP6_BRAFL	C3XQH0	C3YEP6	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.635
C3XQH0_BRAFL	C3YLR1_BRAFL	C3XQH0	C3YLR1	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.665
C3XQH0_BRAFL	C3YRQ1_BRAFL	C3XQH0	C3YRQ1	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.791
C3XQH0_BRAFL	C3YRV4_BRAFL	C3XQH0	C3YRV4	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.632
C3XQH0_BRAFL	C3YV50_BRAFL	C3XQH0	C3YV50	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.529
C3XQH0_BRAFL	C3YW66_BRAFL	C3XQH0	C3YW66	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Ras-related protein rab-9a.	0.632
C3XQH0_BRAFL	C3YYJ2_BRAFL	C3XQH0	C3YYJ2	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.685
C3XQH0_BRAFL	C3YZ95_BRAFL	C3XQH0	C3YZ95	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.972
C3XQH0_BRAFL	C3Z2C8_BRAFL	C3XQH0	C3Z2C8	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.929
C3XQH0_BRAFL	C3Z6Q6_BRAFL	C3XQH0	C3Z6Q6	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.671
C3XQH0_BRAFL	C3Z904_BRAFL	C3XQH0	C3Z904	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	Uncharacterized protein.	0.545