20 items (Branchiostoma floridae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

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co-expression

protein homology

Your Input:
	C3XPI1_BRAFL	DUF1681 domain-containing protein. (257 aa)
	C3XVA5_BRAFL	Uncharacterized protein. (1268 aa)
	C3Y684_BRAFL	Uncharacterized protein. (645 aa)
	C3YGG4_BRAFL	AP complex subunit beta; Belongs to the adaptor complexes large subunit family. (741 aa)
	C3YIJ5_BRAFL	MHD domain-containing protein. (672 aa)
	C3YIJ6_BRAFL	FCH domain-containing protein. (457 aa)
	C3YWX3_BRAFL	ENTH domain-containing protein. (500 aa)
	C3YXU9_BRAFL	ENTH domain-containing protein. (623 aa)
	C3YZV8_BRAFL	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (248 aa)
	C3Z1G4_BRAFL	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (950 aa)
	C3Z3J8_BRAFL	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
	C3Z3W7_BRAFL	TSNAXIP1_N domain-containing protein. (582 aa)
	C3Z576_BRAFL	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (877 aa)
	C3Z9A8_BRAFL	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1533 aa)
	C3ZD42_BRAFL	Uncharacterized protein. (971 aa)
	C3ZEW6_BRAFL	Arrestin_C domain-containing protein. (367 aa)
	C3ZLK1_BRAFL	Uncharacterized protein. (160 aa)
	C3ZLV4_BRAFL	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (351 aa)
	C3ZVY1_BRAFL	Protein kinase domain-containing protein. (149 aa)
	C3ZVY2_BRAFL	Uncharacterized protein. (919 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XPI1_BRAFL	C3XVA5_BRAFL	C3XPI1	C3XVA5	DUF1681 domain-containing protein.	Uncharacterized protein.	0.681
C3XPI1_BRAFL	C3Y684_BRAFL	C3XPI1	C3Y684	DUF1681 domain-containing protein.	Uncharacterized protein.	0.910
C3XPI1_BRAFL	C3YGG4_BRAFL	C3XPI1	C3YGG4	DUF1681 domain-containing protein.	AP complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.858
C3XPI1_BRAFL	C3YIJ5_BRAFL	C3XPI1	C3YIJ5	DUF1681 domain-containing protein.	MHD domain-containing protein.	0.756
C3XPI1_BRAFL	C3YIJ6_BRAFL	C3XPI1	C3YIJ6	DUF1681 domain-containing protein.	FCH domain-containing protein.	0.756
C3XPI1_BRAFL	C3YWX3_BRAFL	C3XPI1	C3YWX3	DUF1681 domain-containing protein.	ENTH domain-containing protein.	0.848
C3XPI1_BRAFL	C3YXU9_BRAFL	C3XPI1	C3YXU9	DUF1681 domain-containing protein.	ENTH domain-containing protein.	0.696
C3XPI1_BRAFL	C3YZV8_BRAFL	C3XPI1	C3YZV8	DUF1681 domain-containing protein.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.881
C3XPI1_BRAFL	C3Z1G4_BRAFL	C3XPI1	C3Z1G4	DUF1681 domain-containing protein.	AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.931
C3XPI1_BRAFL	C3Z3J8_BRAFL	C3XPI1	C3Z3J8	DUF1681 domain-containing protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.904
C3XPI1_BRAFL	C3Z3W7_BRAFL	C3XPI1	C3Z3W7	DUF1681 domain-containing protein.	TSNAXIP1_N domain-containing protein.	0.699
C3XPI1_BRAFL	C3Z576_BRAFL	C3XPI1	C3Z576	DUF1681 domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.602
C3XPI1_BRAFL	C3Z9A8_BRAFL	C3XPI1	C3Z9A8	DUF1681 domain-containing protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.879
C3XPI1_BRAFL	C3ZD42_BRAFL	C3XPI1	C3ZD42	DUF1681 domain-containing protein.	Uncharacterized protein.	0.783
C3XPI1_BRAFL	C3ZLK1_BRAFL	C3XPI1	C3ZLK1	DUF1681 domain-containing protein.	Uncharacterized protein.	0.989
C3XPI1_BRAFL	C3ZLV4_BRAFL	C3XPI1	C3ZLV4	DUF1681 domain-containing protein.	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.	0.987
C3XPI1_BRAFL	C3ZVY1_BRAFL	C3XPI1	C3ZVY1	DUF1681 domain-containing protein.	Protein kinase domain-containing protein.	0.966
C3XPI1_BRAFL	C3ZVY2_BRAFL	C3XPI1	C3ZVY2	DUF1681 domain-containing protein.	Uncharacterized protein.	0.966
C3XVA5_BRAFL	C3XPI1_BRAFL	C3XVA5	C3XPI1	Uncharacterized protein.	DUF1681 domain-containing protein.	0.681
C3XVA5_BRAFL	C3Y684_BRAFL	C3XVA5	C3Y684	Uncharacterized protein.	Uncharacterized protein.	0.803