(6 nodes) Ragulator complex, and Gtr1/RagA G protein network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3YWS2_BRAFL	Robl_LC7 domain-containing protein. (125 aa)
	C3YZ87_BRAFL	Uncharacterized protein. (234 aa)
	C3ZE23_BRAFL	Uncharacterized protein. (101 aa)
	C3ZF20_BRAFL	Uncharacterized protein. (306 aa)
	C3ZRE4_BRAFL	Uncharacterized protein. (124 aa)
	C3ZTZ4_BRAFL	Uncharacterized protein. (345 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3YWS2_BRAFL	C3YZ87_BRAFL	C3YWS2	C3YZ87	Robl_LC7 domain-containing protein.	Uncharacterized protein.	0.999
C3YWS2_BRAFL	C3ZE23_BRAFL	C3YWS2	C3ZE23	Robl_LC7 domain-containing protein.	Uncharacterized protein.	0.999
C3YWS2_BRAFL	C3ZF20_BRAFL	C3YWS2	C3ZF20	Robl_LC7 domain-containing protein.	Uncharacterized protein.	0.997
C3YWS2_BRAFL	C3ZRE4_BRAFL	C3YWS2	C3ZRE4	Robl_LC7 domain-containing protein.	Uncharacterized protein.	0.999
C3YWS2_BRAFL	C3ZTZ4_BRAFL	C3YWS2	C3ZTZ4	Robl_LC7 domain-containing protein.	Uncharacterized protein.	0.973
C3YZ87_BRAFL	C3YWS2_BRAFL	C3YZ87	C3YWS2	Uncharacterized protein.	Robl_LC7 domain-containing protein.	0.999
C3YZ87_BRAFL	C3ZE23_BRAFL	C3YZ87	C3ZE23	Uncharacterized protein.	Uncharacterized protein.	0.999
C3YZ87_BRAFL	C3ZF20_BRAFL	C3YZ87	C3ZF20	Uncharacterized protein.	Uncharacterized protein.	0.996
C3YZ87_BRAFL	C3ZRE4_BRAFL	C3YZ87	C3ZRE4	Uncharacterized protein.	Uncharacterized protein.	0.999
C3YZ87_BRAFL	C3ZTZ4_BRAFL	C3YZ87	C3ZTZ4	Uncharacterized protein.	Uncharacterized protein.	0.966
C3ZE23_BRAFL	C3YWS2_BRAFL	C3ZE23	C3YWS2	Uncharacterized protein.	Robl_LC7 domain-containing protein.	0.999
C3ZE23_BRAFL	C3YZ87_BRAFL	C3ZE23	C3YZ87	Uncharacterized protein.	Uncharacterized protein.	0.999
C3ZE23_BRAFL	C3ZF20_BRAFL	C3ZE23	C3ZF20	Uncharacterized protein.	Uncharacterized protein.	0.995
C3ZE23_BRAFL	C3ZRE4_BRAFL	C3ZE23	C3ZRE4	Uncharacterized protein.	Uncharacterized protein.	0.984
C3ZE23_BRAFL	C3ZTZ4_BRAFL	C3ZE23	C3ZTZ4	Uncharacterized protein.	Uncharacterized protein.	0.956
C3ZF20_BRAFL	C3YWS2_BRAFL	C3ZF20	C3YWS2	Uncharacterized protein.	Robl_LC7 domain-containing protein.	0.997
C3ZF20_BRAFL	C3YZ87_BRAFL	C3ZF20	C3YZ87	Uncharacterized protein.	Uncharacterized protein.	0.996
C3ZF20_BRAFL	C3ZE23_BRAFL	C3ZF20	C3ZE23	Uncharacterized protein.	Uncharacterized protein.	0.995
C3ZF20_BRAFL	C3ZRE4_BRAFL	C3ZF20	C3ZRE4	Uncharacterized protein.	Uncharacterized protein.	0.996
C3ZF20_BRAFL	C3ZTZ4_BRAFL	C3ZF20	C3ZTZ4	Uncharacterized protein.	Uncharacterized protein.	0.999