(15 nodes) Seh1-associated complex, and Protein SZT2 network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3Y319_BRAFL	Uncharacterized protein. (450 aa)
	C3Y6A3_BRAFL	Uncharacterized protein. (426 aa)
	C3YC70_BRAFL	Uncharacterized protein. (448 aa)
	C3YFB9_BRAFL	Uncharacterized protein. (968 aa)
	C3YJB0_BRAFL	WD_REPEATS_REGION domain-containing protein. (739 aa)
	C3YUN5_BRAFL	Zinc_ribbon_16 domain-containing protein. (885 aa)
	C3Z2L1_BRAFL	Uncharacterized protein. (452 aa)
	C3Z8N1_BRAFL	Zinc_ribbon_16 domain-containing protein. (838 aa)
	C3ZDE1_BRAFL	Uncharacterized protein; Belongs to the WD repeat SEC13 family. (323 aa)
	C3ZEI0_BRAFL	Uncharacterized protein. (246 aa)
	C3ZHU1_BRAFL	DEP domain-containing protein. (1742 aa)
	C3ZPW5_BRAFL	Uncharacterized protein. (201 aa)
	C3ZPW6_BRAFL	Uncharacterized protein. (619 aa)
	C3ZPW7_BRAFL	Uncharacterized protein. (3219 aa)
	C3ZVA8_BRAFL	Uncharacterized protein. (385 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3Y319_BRAFL	C3Y6A3_BRAFL	C3Y319	C3Y6A3	Uncharacterized protein.	Uncharacterized protein.	0.994
C3Y319_BRAFL	C3YC70_BRAFL	C3Y319	C3YC70	Uncharacterized protein.	Uncharacterized protein.	0.798
C3Y319_BRAFL	C3YFB9_BRAFL	C3Y319	C3YFB9	Uncharacterized protein.	Uncharacterized protein.	0.979
C3Y319_BRAFL	C3YJB0_BRAFL	C3Y319	C3YJB0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.979
C3Y319_BRAFL	C3YUN5_BRAFL	C3Y319	C3YUN5	Uncharacterized protein.	Zinc_ribbon_16 domain-containing protein.	0.588
C3Y319_BRAFL	C3Z2L1_BRAFL	C3Y319	C3Z2L1	Uncharacterized protein.	Uncharacterized protein.	0.993
C3Y319_BRAFL	C3Z8N1_BRAFL	C3Y319	C3Z8N1	Uncharacterized protein.	Zinc_ribbon_16 domain-containing protein.	0.588
C3Y319_BRAFL	C3ZDE1_BRAFL	C3Y319	C3ZDE1	Uncharacterized protein.	Uncharacterized protein; Belongs to the WD repeat SEC13 family.	0.619
C3Y319_BRAFL	C3ZHU1_BRAFL	C3Y319	C3ZHU1	Uncharacterized protein.	DEP domain-containing protein.	0.984
C3Y319_BRAFL	C3ZPW5_BRAFL	C3Y319	C3ZPW5	Uncharacterized protein.	Uncharacterized protein.	0.946
C3Y319_BRAFL	C3ZPW6_BRAFL	C3Y319	C3ZPW6	Uncharacterized protein.	Uncharacterized protein.	0.946
C3Y319_BRAFL	C3ZPW7_BRAFL	C3Y319	C3ZPW7	Uncharacterized protein.	Uncharacterized protein.	0.946
C3Y319_BRAFL	C3ZVA8_BRAFL	C3Y319	C3ZVA8	Uncharacterized protein.	Uncharacterized protein.	0.978
C3Y6A3_BRAFL	C3Y319_BRAFL	C3Y6A3	C3Y319	Uncharacterized protein.	Uncharacterized protein.	0.994
C3Y6A3_BRAFL	C3YC70_BRAFL	C3Y6A3	C3YC70	Uncharacterized protein.	Uncharacterized protein.	0.771
C3Y6A3_BRAFL	C3YFB9_BRAFL	C3Y6A3	C3YFB9	Uncharacterized protein.	Uncharacterized protein.	0.979
C3Y6A3_BRAFL	C3YJB0_BRAFL	C3Y6A3	C3YJB0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.980
C3Y6A3_BRAFL	C3YUN5_BRAFL	C3Y6A3	C3YUN5	Uncharacterized protein.	Zinc_ribbon_16 domain-containing protein.	0.591
C3Y6A3_BRAFL	C3Z2L1_BRAFL	C3Y6A3	C3Z2L1	Uncharacterized protein.	Uncharacterized protein.	0.993
C3Y6A3_BRAFL	C3Z8N1_BRAFL	C3Y6A3	C3Z8N1	Uncharacterized protein.	Zinc_ribbon_16 domain-containing protein.	0.591