STRINGSTRING
C3YUE8_BRAFL C3YUE8_BRAFL C3ZEM6_BRAFL C3ZEM6_BRAFL C3ZEY1_BRAFL C3ZEY1_BRAFL C3ZJI8_BRAFL C3ZJI8_BRAFL C3ZNT2_BRAFL C3ZNT2_BRAFL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C3YUE8_BRAFLUbiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy. (745 aa)
C3ZEM6_BRAFLAutophagy-related protein 3. (1022 aa)
C3ZEY1_BRAFLWD_REPEATS_REGION domain-containing protein. (601 aa)
C3ZJI8_BRAFLUbiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (86 aa)
C3ZNT2_BRAFLAutophagy protein 5; Involved in autophagic vesicle formation. (261 aa)
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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