(5 nodes) Autophagy protein Atg8 ubiquitin-like, and PB1 domain network (Branchiostoma floridae)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XS77_BRAFL	PB1 domain-containing protein. (340 aa)
	C3XU59_BRAFL	Uncharacterized protein. (120 aa)
	C3XXF8_BRAFL	Uncharacterized protein. (554 aa)
	C3ZI99_BRAFL	Uncharacterized protein. (117 aa)
	C3ZWV2_BRAFL	Uncharacterized protein. (1163 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XS77_BRAFL	C3XU59_BRAFL	C3XS77	C3XU59	PB1 domain-containing protein.	Uncharacterized protein.	0.999
C3XS77_BRAFL	C3XXF8_BRAFL	C3XS77	C3XXF8	PB1 domain-containing protein.	Uncharacterized protein.	0.518
C3XS77_BRAFL	C3ZI99_BRAFL	C3XS77	C3ZI99	PB1 domain-containing protein.	Uncharacterized protein.	0.999
C3XS77_BRAFL	C3ZWV2_BRAFL	C3XS77	C3ZWV2	PB1 domain-containing protein.	Uncharacterized protein.	0.994
C3XU59_BRAFL	C3XS77_BRAFL	C3XU59	C3XS77	Uncharacterized protein.	PB1 domain-containing protein.	0.999
C3XU59_BRAFL	C3XXF8_BRAFL	C3XU59	C3XXF8	Uncharacterized protein.	Uncharacterized protein.	0.981
C3XU59_BRAFL	C3ZI99_BRAFL	C3XU59	C3ZI99	Uncharacterized protein.	Uncharacterized protein.	0.733
C3XU59_BRAFL	C3ZWV2_BRAFL	C3XU59	C3ZWV2	Uncharacterized protein.	Uncharacterized protein.	0.999
C3XXF8_BRAFL	C3XS77_BRAFL	C3XXF8	C3XS77	Uncharacterized protein.	PB1 domain-containing protein.	0.518
C3XXF8_BRAFL	C3XU59_BRAFL	C3XXF8	C3XU59	Uncharacterized protein.	Uncharacterized protein.	0.981
C3XXF8_BRAFL	C3ZI99_BRAFL	C3XXF8	C3ZI99	Uncharacterized protein.	Uncharacterized protein.	0.978
C3XXF8_BRAFL	C3ZWV2_BRAFL	C3XXF8	C3ZWV2	Uncharacterized protein.	Uncharacterized protein.	0.982
C3ZI99_BRAFL	C3XS77_BRAFL	C3ZI99	C3XS77	Uncharacterized protein.	PB1 domain-containing protein.	0.999
C3ZI99_BRAFL	C3XU59_BRAFL	C3ZI99	C3XU59	Uncharacterized protein.	Uncharacterized protein.	0.733
C3ZI99_BRAFL	C3XXF8_BRAFL	C3ZI99	C3XXF8	Uncharacterized protein.	Uncharacterized protein.	0.978
C3ZI99_BRAFL	C3ZWV2_BRAFL	C3ZI99	C3ZWV2	Uncharacterized protein.	Uncharacterized protein.	0.999
C3ZWV2_BRAFL	C3XS77_BRAFL	C3ZWV2	C3XS77	Uncharacterized protein.	PB1 domain-containing protein.	0.994
C3ZWV2_BRAFL	C3XU59_BRAFL	C3ZWV2	C3XU59	Uncharacterized protein.	Uncharacterized protein.	0.999
C3ZWV2_BRAFL	C3XXF8_BRAFL	C3ZWV2	C3XXF8	Uncharacterized protein.	Uncharacterized protein.	0.982
C3ZWV2_BRAFL	C3ZI99_BRAFL	C3ZWV2	C3ZI99	Uncharacterized protein.	Uncharacterized protein.	0.999