(98 nodes) Mixed, incl. Cytoplasmic microtubule, and Tubulin network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XRP1_BRAFL	Uncharacterized protein. (1157 aa)
	C3XSU3_BRAFL	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
	C3XUE0_BRAFL	Uncharacterized protein. (153 aa)
	C3XVZ0_BRAFL	Uncharacterized protein. (221 aa)
	C3XWF7_BRAFL	Uncharacterized protein. (607 aa)
	SMAD1	CAP-Gly domain-containing protein. (2132 aa)
	C3XYQ6_BRAFL	CAP-Gly domain-containing protein. (896 aa)
	C3Y1X8_BRAFL	Uncharacterized protein. (307 aa)
	C3Y1X9_BRAFL	EB1 C-terminal domain-containing protein. (226 aa)
	Islet	Uncharacterized protein. (528 aa)
	C3Y248_BRAFL	Uncharacterized protein. (117 aa)
	C3Y2F5_BRAFL	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (453 aa)
	C3Y2K0_BRAFL	Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (298 aa)
	C3Y2K1_BRAFL	Tubulin domain-containing protein. (125 aa)
	C3Y2M3_BRAFL	Tubulin_C domain-containing protein. (154 aa)
	C3Y2M4_BRAFL	Tubulin domain-containing protein; Belongs to the tubulin family. (575 aa)
	C3Y2P9_BRAFL	Uncharacterized protein. (250 aa)
	C3Y312_BRAFL	Uncharacterized protein. (177 aa)
	C3Y3Q1_BRAFL	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (446 aa)
	C3Y528_BRAFL	Uncharacterized protein. (1907 aa)
	C3Y8B8_BRAFL	Uncharacterized protein. (122 aa)
	C3Y8F5_BRAFL	Uncharacterized protein. (159 aa)
	C3Y9F1_BRAFL	Uncharacterized protein. (216 aa)
	C3Y9S5_BRAFL	Uncharacterized protein. (481 aa)
	C3Y9S6_BRAFL	CAP-Gly domain-containing protein. (68 aa)
	C3YAU2_BRAFL	Ubiquitin-like domain-containing protein. (628 aa)
	C3YBY6_BRAFL	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (416 aa)
	C3YC29_BRAFL	Uncharacterized protein. (253 aa)
	C3YCA1_BRAFL	WD_REPEATS_REGION domain-containing protein. (625 aa)
	C3YCQ3_BRAFL	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (961 aa)
	C3YDJ9_BRAFL	Uncharacterized protein. (537 aa)
	C3YDQ7_BRAFL	Uncharacterized protein. (499 aa)
	C3YEZ0_BRAFL	Uncharacterized protein. (1074 aa)
	C3YF46_BRAFL	Uncharacterized protein. (420 aa)
	C3YHW2_BRAFL	Uncharacterized protein. (2268 aa)
	C3YI54_BRAFL	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (416 aa)
	C3YIE9_BRAFL	Uncharacterized protein. (138 aa)
	C3YJ97_BRAFL	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (615 aa)
	C3YJC6_BRAFL	DUF4201 domain-containing protein. (967 aa)
	C3YKK1_BRAFL	Uncharacterized protein. (174 aa)
	C3YKY7_BRAFL	Uncharacterized protein. (149 aa)
	C3YMF1_BRAFL	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (446 aa)
	C3YMF2_BRAFL	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (331 aa)
	C3YP39_BRAFL	Uncharacterized protein. (330 aa)
	C3YQF2_BRAFL	Uncharacterized protein. (641 aa)
	C3YRS0_BRAFL	Uncharacterized protein; Belongs to the tubulin family. (459 aa)
	C3YSJ7_BRAFL	Uncharacterized protein. (211 aa)
	C3YSP0_BRAFL	Uncharacterized protein. (499 aa)
	C3YTW1_BRAFL	Uncharacterized protein. (311 aa)
	C3YTZ3_BRAFL	Uncharacterized protein. (549 aa)
	C3YV55_BRAFL	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (454 aa)
	C3YVT7_BRAFL	Uncharacterized protein. (177 aa)
	C3YW48_BRAFL	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (343 aa)
	C3YWC2_BRAFL	Uncharacterized protein. (108 aa)
	C3YXU7_BRAFL	Transgelin; Belongs to the calponin family. (234 aa)
	C3YYE7_BRAFL	Uncharacterized protein. (576 aa)
	C3YYJ1_BRAFL	Uncharacterized protein. (577 aa)
	C3YYW6_BRAFL	Uncharacterized protein. (699 aa)
	C3Z2Q4_BRAFL	Uncharacterized protein. (379 aa)
	C3Z317_BRAFL	Uncharacterized protein. (270 aa)
	C3Z327_BRAFL	Uncharacterized protein. (239 aa)
	C3Z395_BRAFL	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
	C3Z3P2_BRAFL	Uncharacterized protein. (100 aa)
	C3Z491_BRAFL	Uncharacterized protein. (414 aa)
	C3Z492_BRAFL	Uncharacterized protein. (113 aa)
	C3Z547_BRAFL	Uncharacterized protein. (244 aa)
	C3Z614_BRAFL	Uncharacterized protein. (199 aa)
	C3Z6R5_BRAFL	Uncharacterized protein. (863 aa)
	C3Z6R8_BRAFL	Uncharacterized protein. (1477 aa)
	C3Z7E6_BRAFL	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (614 aa)
	C3Z7E8_BRAFL	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (555 aa)
	C3Z8K3_BRAFL	Tubulin_C domain-containing protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (293 aa)
	C3Z8W1_BRAFL	Uncharacterized protein. (833 aa)
	C3ZA11_BRAFL	Uncharacterized protein. (206 aa)
	C3ZB94_BRAFL	DUF667 domain-containing protein. (193 aa)
	C3ZB95_BRAFL	DUF667 domain-containing protein. (194 aa)
	C3ZCL6_BRAFL	Uncharacterized protein. (154 aa)
	C3ZDQ1_BRAFL	Uncharacterized protein. (722 aa)
	C3ZFS9_BRAFL	Uncharacterized protein. (169 aa)
	C3ZH48_BRAFL	SAM domain-containing protein. (621 aa)
	C3ZI55_BRAFL	Uncharacterized protein. (221 aa)
	C3ZI69_BRAFL	Uncharacterized protein. (165 aa)
	C3ZI84_BRAFL	Uncharacterized protein. (253 aa)
	C3ZIA2_BRAFL	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (506 aa)
	C3ZJU2_BRAFL	Uncharacterized protein. (188 aa)
	C3ZKH5_BRAFL	Uncharacterized protein. (251 aa)
	C3ZL48_BRAFL	Uncharacterized protein. (402 aa)
	C3ZLL9_BRAFL	Uncharacterized protein. (1174 aa)
	C3ZMQ7_BRAFL	Uncharacterized protein. (445 aa)
	C3ZPW0_BRAFL	Tubulin_C domain-containing protein. (150 aa)
	C3ZR63_BRAFL	Enkurin domain-containing protein. (276 aa)
	C3ZSV1_BRAFL	14_3_3 domain-containing protein; Belongs to the 14-3-3 family. (254 aa)
	C3ZTM2_BRAFL	Nuclear receptor domain-containing protein. (1232 aa)
	C3ZUN4_BRAFL	CCHC-type domain-containing protein. (583 aa)
	C3ZUW5_BRAFL	Tubulin domain-containing protein. (127 aa)
	C3ZUW6_BRAFL	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
	C3ZUW8_BRAFL	Tubulin_C domain-containing protein. (84 aa)
	C3ZZL7_BRAFL	Uncharacterized protein. (241 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XRP1_BRAFL	C3YCQ3_BRAFL	C3XRP1	C3YCQ3	Uncharacterized protein.	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.606
C3XRP1_BRAFL	C3YKY7_BRAFL	C3XRP1	C3YKY7	Uncharacterized protein.	Uncharacterized protein.	0.535
C3XRP1_BRAFL	C3YYW6_BRAFL	C3XRP1	C3YYW6	Uncharacterized protein.	Uncharacterized protein.	0.844
C3XRP1_BRAFL	C3Z6R5_BRAFL	C3XRP1	C3Z6R5	Uncharacterized protein.	Uncharacterized protein.	0.645
C3XRP1_BRAFL	C3Z6R8_BRAFL	C3XRP1	C3Z6R8	Uncharacterized protein.	Uncharacterized protein.	0.882
C3XRP1_BRAFL	C3Z7E6_BRAFL	C3XRP1	C3Z7E6	Uncharacterized protein.	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.454
C3XRP1_BRAFL	C3Z7E8_BRAFL	C3XRP1	C3Z7E8	Uncharacterized protein.	Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.454
C3XRP1_BRAFL	C3ZIA2_BRAFL	C3XRP1	C3ZIA2	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.406
C3XSU3_BRAFL	C3XWF7_BRAFL	C3XSU3	C3XWF7	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.497
C3XSU3_BRAFL	C3Y1X8_BRAFL	C3XSU3	C3Y1X8	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.433
C3XSU3_BRAFL	C3Y1X9_BRAFL	C3XSU3	C3Y1X9	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	EB1 C-terminal domain-containing protein.	0.435
C3XSU3_BRAFL	C3Y2F5_BRAFL	C3XSU3	C3Y2F5	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.970
C3XSU3_BRAFL	C3Y3Q1_BRAFL	C3XSU3	C3Y3Q1	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.970
C3XSU3_BRAFL	C3Y528_BRAFL	C3XSU3	C3Y528	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.474
C3XSU3_BRAFL	C3YHW2_BRAFL	C3XSU3	C3YHW2	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.497
C3XSU3_BRAFL	C3YMF1_BRAFL	C3XSU3	C3YMF1	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.970
C3XSU3_BRAFL	C3YMF2_BRAFL	C3XSU3	C3YMF2	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.679
C3XSU3_BRAFL	C3YRS0_BRAFL	C3XSU3	C3YRS0	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein; Belongs to the tubulin family.	0.680
C3XSU3_BRAFL	C3YXU7_BRAFL	C3XSU3	C3YXU7	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Transgelin; Belongs to the calponin family.	0.474
C3XSU3_BRAFL	C3Z6R5_BRAFL	C3XSU3	C3Z6R5	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.630