74 items (Branchiostoma floridae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XQL4_BRAFL	Uncharacterized protein. (105 aa)
	C3XR31_BRAFL	Uncharacterized protein. (1699 aa)
	C3XUI6_BRAFL	Uncharacterized protein. (61 aa)
	C3XUI9_BRAFL	Uncharacterized protein. (393 aa)
	C3XX25_BRAFL	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (2655 aa)
	C3XXC1_BRAFL	Uncharacterized protein. (1323 aa)
	C3XYW4_BRAFL	Uncharacterized protein. (268 aa)
	C3XYW5_BRAFL	CA domain-containing protein. (266 aa)
	C3XZ70_BRAFL	Uncharacterized protein. (2206 aa)
	C3Y2F4_BRAFL	ANK_REP_REGION domain-containing protein. (99 aa)
	C3Y2I1_BRAFL	Uncharacterized protein. (277 aa)
	C3Y3A0_BRAFL	Uncharacterized protein. (1103 aa)
	C3Y3A1_BRAFL	Uncharacterized protein. (2847 aa)
	C3Y4X1_BRAFL	Uncharacterized protein. (149 aa)
	C3Y5U7_BRAFL	Uncharacterized protein. (1518 aa)
	C3Y5U8_BRAFL	Uncharacterized protein. (912 aa)
	C3Y5W6_BRAFL	Uncharacterized protein. (1125 aa)
	C3Y635_BRAFL	Uncharacterized protein. (109 aa)
	C3Y8S5_BRAFL	CUB domain-containing protein. (105 aa)
	C3YAB0_BRAFL	Ig-like domain-containing protein. (406 aa)
	C3YD02_BRAFL	Uncharacterized protein. (381 aa)
	C3YE37_BRAFL	Uncharacterized protein. (571 aa)
	C3YEW6_BRAFL	Uncharacterized protein. (112 aa)
	C3YHB7_BRAFL	Uncharacterized protein. (686 aa)
	C3YI18_BRAFL	Uncharacterized protein. (1640 aa)
	C3YKF2_BRAFL	Uncharacterized protein; Belongs to the MAGUK family. (1549 aa)
	C3YM58_BRAFL	Uncharacterized protein. (260 aa)
	C3YSL0_BRAFL	Uncharacterized protein. (438 aa)
	C3YU51_BRAFL	Laminin EGF-like domain-containing protein. (79 aa)
	C3YVE3_BRAFL	Uncharacterized protein. (417 aa)
	C3YVE4_BRAFL	Uncharacterized protein. (271 aa)
	C3YVE5_BRAFL	CA domain-containing protein. (107 aa)
	C3YVE6_BRAFL	CA domain-containing protein. (191 aa)
	C3YX35_BRAFL	Uncharacterized protein. (541 aa)
	C3YX73_BRAFL	Uncharacterized protein. (524 aa)
	C3Z1K3_BRAFL	CA domain-containing protein. (112 aa)
	C3Z2F0_BRAFL	Uncharacterized protein. (147 aa)
	C3Z417_BRAFL	CA domain-containing protein. (148 aa)
	C3Z4A1_BRAFL	CA domain-containing protein. (173 aa)
	C3Z4J2_BRAFL	Uncharacterized protein. (384 aa)
	C3Z5C4_BRAFL	Uncharacterized protein. (3422 aa)
	C3Z7I9_BRAFL	CA domain-containing protein. (147 aa)
	C3Z7R4_BRAFL	Death domain-containing protein. (750 aa)
	C3Z977_BRAFL	C2 domain-containing protein. (143 aa)
	C3Z979_BRAFL	C2 domain-containing protein. (94 aa)
	C3ZA59_BRAFL	Uncharacterized protein. (71 aa)
	C3ZD78_BRAFL	Uncharacterized protein. (208 aa)
	C3ZFS0_BRAFL	Uncharacterized protein. (1894 aa)
	C3ZFS1_BRAFL	CA domain-containing protein. (110 aa)
	C3ZJZ0_BRAFL	Uncharacterized protein. (236 aa)
	C3ZLC2_BRAFL	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (943 aa)
	C3ZLD8_BRAFL	Uncharacterized protein. (596 aa)
	C3ZLD9_BRAFL	Uncharacterized protein. (587 aa)
	C3ZLK9_BRAFL	Uncharacterized protein. (577 aa)
	C3ZM59_BRAFL	Uncharacterized protein. (279 aa)
	C3ZMB6_BRAFL	Uncharacterized protein. (593 aa)
	C3ZMZ0_BRAFL	Uncharacterized protein. (652 aa)
	C3ZMZ2_BRAFL	Uncharacterized protein. (656 aa)
	C3ZQK0_BRAFL	SAM domain-containing protein. (115 aa)
	C3ZR22_BRAFL	Uncharacterized protein. (214 aa)
	C3ZSI7_BRAFL	Ig-like domain-containing protein. (909 aa)
	C3ZTP9_BRAFL	Uncharacterized protein. (488 aa)
	C3ZTQ0_BRAFL	Uncharacterized protein. (563 aa)
	C3ZUH9_BRAFL	Uncharacterized protein. (4039 aa)
	C3ZUI0_BRAFL	Uncharacterized protein. (980 aa)
	C3ZUX9_BRAFL	Uncharacterized protein. (1694 aa)
	C3ZVA9_BRAFL	Uncharacterized protein. (1649 aa)
	C3ZW46_BRAFL	Uncharacterized protein. (106 aa)
	C3ZWI7_BRAFL	Uncharacterized protein. (268 aa)
	C3ZWR0_BRAFL	Uncharacterized protein. (405 aa)
	C3ZWR1_BRAFL	Uncharacterized protein. (581 aa)
	C3ZY31_BRAFL	Uncharacterized protein. (222 aa)
	C3ZY32_BRAFL	Uncharacterized protein. (199 aa)
	C3ZYT2_BRAFL	Uncharacterized protein. (705 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XR31_BRAFL	C3XUI9_BRAFL	C3XR31	C3XUI9	Uncharacterized protein.	Uncharacterized protein.	0.499
C3XUI6_BRAFL	C3Y5U7_BRAFL	C3XUI6	C3Y5U7	Uncharacterized protein.	Uncharacterized protein.	0.537
C3XUI6_BRAFL	C3Y5U8_BRAFL	C3XUI6	C3Y5U8	Uncharacterized protein.	Uncharacterized protein.	0.537
C3XUI9_BRAFL	C3XR31_BRAFL	C3XUI9	C3XR31	Uncharacterized protein.	Uncharacterized protein.	0.499
C3XUI9_BRAFL	C3XX25_BRAFL	C3XUI9	C3XX25	Uncharacterized protein.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.515
C3XUI9_BRAFL	C3XYW4_BRAFL	C3XUI9	C3XYW4	Uncharacterized protein.	Uncharacterized protein.	0.441
C3XUI9_BRAFL	C3XZ70_BRAFL	C3XUI9	C3XZ70	Uncharacterized protein.	Uncharacterized protein.	0.499
C3XUI9_BRAFL	C3Y4X1_BRAFL	C3XUI9	C3Y4X1	Uncharacterized protein.	Uncharacterized protein.	0.515
C3XUI9_BRAFL	C3Y5U7_BRAFL	C3XUI9	C3Y5U7	Uncharacterized protein.	Uncharacterized protein.	0.902
C3XUI9_BRAFL	C3Y5U8_BRAFL	C3XUI9	C3Y5U8	Uncharacterized protein.	Uncharacterized protein.	0.902
C3XUI9_BRAFL	C3YE37_BRAFL	C3XUI9	C3YE37	Uncharacterized protein.	Uncharacterized protein.	0.515
C3XUI9_BRAFL	C3YI18_BRAFL	C3XUI9	C3YI18	Uncharacterized protein.	Uncharacterized protein.	0.603
C3XUI9_BRAFL	C3YKF2_BRAFL	C3XUI9	C3YKF2	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.653
C3XUI9_BRAFL	C3YVE6_BRAFL	C3XUI9	C3YVE6	Uncharacterized protein.	CA domain-containing protein.	0.515
C3XUI9_BRAFL	C3Z5C4_BRAFL	C3XUI9	C3Z5C4	Uncharacterized protein.	Uncharacterized protein.	0.515
C3XUI9_BRAFL	C3ZFS0_BRAFL	C3XUI9	C3ZFS0	Uncharacterized protein.	Uncharacterized protein.	0.515
C3XUI9_BRAFL	C3ZUH9_BRAFL	C3XUI9	C3ZUH9	Uncharacterized protein.	Uncharacterized protein.	0.515
C3XUI9_BRAFL	C3ZUI0_BRAFL	C3XUI9	C3ZUI0	Uncharacterized protein.	Uncharacterized protein.	0.515
C3XUI9_BRAFL	C3ZUX9_BRAFL	C3XUI9	C3ZUX9	Uncharacterized protein.	Uncharacterized protein.	0.515
C3XUI9_BRAFL	C3ZVA9_BRAFL	C3XUI9	C3ZVA9	Uncharacterized protein.	Uncharacterized protein.	0.499