(44 nodes) Mixed, incl. Hyaluronan biosynthesis and export, and Tetratricopeptide repeat network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XWH0_BRAFL	Uncharacterized protein. (1333 aa)
	C3XZZ7_BRAFL	TPR_REGION domain-containing protein. (1305 aa)
	C3Y0D3_BRAFL	Uncharacterized protein. (592 aa)
	C3Y944_BRAFL	TPR_REGION domain-containing protein. (582 aa)
	C3YA85_BRAFL	TPR_REGION domain-containing protein. (859 aa)
	C3YHX3_BRAFL	TPR_REGION domain-containing protein. (955 aa)
	C3YHX8_BRAFL	Uncharacterized protein. (3744 aa)
	C3YI24_BRAFL	TPR_REGION domain-containing protein. (550 aa)
	C3YI88_BRAFL	TPR_REGION domain-containing protein. (655 aa)
	C3YLQ8_BRAFL	DED domain-containing protein. (1125 aa)
	C3YME1_BRAFL	TPR_REGION domain-containing protein. (774 aa)
	C3YN87_BRAFL	TPR_REGION domain-containing protein. (930 aa)
	C3YN92_BRAFL	TPR_REGION domain-containing protein. (1668 aa)
	C3YPV0_BRAFL	Uncharacterized protein. (1337 aa)
	C3YQY0_BRAFL	FBA domain-containing protein. (1949 aa)
	C3YTE7_BRAFL	TPR_REGION domain-containing protein. (387 aa)
	C3YX98_BRAFL	TPR_REGION domain-containing protein. (782 aa)
	C3Z6X3_BRAFL	Uncharacterized protein. (2997 aa)
	C3ZBK5_BRAFL	Uncharacterized protein. (566 aa)
	C3ZC81_BRAFL	Uncharacterized protein. (233 aa)
	C3ZDV0_BRAFL	TPR_REGION domain-containing protein. (969 aa)
	C3ZFH4_BRAFL	Uncharacterized protein. (1778 aa)
	C3ZFH5_BRAFL	Uncharacterized protein. (1627 aa)
	C3ZFH8_BRAFL	Uncharacterized protein. (1598 aa)
	C3ZFI0_BRAFL	Uncharacterized protein. (776 aa)
	C3ZFI1_BRAFL	Uncharacterized protein. (442 aa)
	C3ZFI9_BRAFL	Uncharacterized protein. (1023 aa)
	C3ZFZ5_BRAFL	Uncharacterized protein. (943 aa)
	C3ZFZ7_BRAFL	Uncharacterized protein. (1437 aa)
	C3ZHF2_BRAFL	Uncharacterized protein. (557 aa)
	C3ZHS5_BRAFL	TPR_REGION domain-containing protein. (714 aa)
	C3ZKT4_BRAFL	Uncharacterized protein. (1752 aa)
	DVL3	CA domain-containing protein. (1290 aa)
	C3ZNB3_BRAFL	Uncharacterized protein. (539 aa)
	C3ZNB5_BRAFL	Uncharacterized protein. (621 aa)
	C3ZR17_BRAFL	TPR_REGION domain-containing protein. (1401 aa)
	C3ZRI8_BRAFL	TPR_REGION domain-containing protein. (1491 aa)
	C3ZRJ6_BRAFL	TPR_REGION domain-containing protein. (1713 aa)
	C3ZRW6_BRAFL	PlsC domain-containing protein. (257 aa)
	C3ZWX3_BRAFL	Uncharacterized protein. (501 aa)
	C3ZWY6_BRAFL	Uncharacterized protein. (564 aa)
	C3ZWY7_BRAFL	Uncharacterized protein. (563 aa)
	C4A0L0_BRAFL	Uncharacterized protein. (418 aa)
	C4A0S9_BRAFL	TPR_REGION domain-containing protein. (984 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XWH0_BRAFL	C3Y0D3_BRAFL	C3XWH0	C3Y0D3	Uncharacterized protein.	Uncharacterized protein.	0.928
C3XWH0_BRAFL	C3ZC81_BRAFL	C3XWH0	C3ZC81	Uncharacterized protein.	Uncharacterized protein.	0.664
C3Y0D3_BRAFL	C3XWH0_BRAFL	C3Y0D3	C3XWH0	Uncharacterized protein.	Uncharacterized protein.	0.928
C3Y0D3_BRAFL	C3ZC81_BRAFL	C3Y0D3	C3ZC81	Uncharacterized protein.	Uncharacterized protein.	0.820
C3Y0D3_BRAFL	DVL3	C3Y0D3	C3ZLS9	Uncharacterized protein.	CA domain-containing protein.	0.873
C3ZC81_BRAFL	C3XWH0_BRAFL	C3ZC81	C3XWH0	Uncharacterized protein.	Uncharacterized protein.	0.664
C3ZC81_BRAFL	C3Y0D3_BRAFL	C3ZC81	C3Y0D3	Uncharacterized protein.	Uncharacterized protein.	0.820
DVL3	C3Y0D3_BRAFL	C3ZLS9	C3Y0D3	CA domain-containing protein.	Uncharacterized protein.	0.873