(11 nodes) Lipoprotein particle binding, and Regulation of NMDA receptor activity network (Branchiostoma floridae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XV06_BRAFL	Uncharacterized protein. (1546 aa)
	C3Y338_BRAFL	Uncharacterized protein. (1291 aa)
	C3Y339_BRAFL	Uncharacterized protein. (973 aa)
	C3Y985_BRAFL	Uncharacterized protein. (282 aa)
	C3YBS3_BRAFL	Uncharacterized protein. (875 aa)
	C3YLS4_BRAFL	Uncharacterized protein. (778 aa)
	C3YW30_BRAFL	Uncharacterized protein; Belongs to the peptidase S8 family. (682 aa)
	C3YW31_BRAFL	Uncharacterized protein; Belongs to the peptidase S8 family. (697 aa)
	C3Z2M5_BRAFL	Uncharacterized protein. (2060 aa)
	C3ZCE1_BRAFL	C-type lectin domain-containing protein; Belongs to the peptidase S8 family. (839 aa)
	C3ZFK3_BRAFL	Uncharacterized protein. (787 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3Y338_BRAFL	C3YW30_BRAFL	C3Y338	C3YW30	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S8 family.	0.581
C3Y338_BRAFL	C3YW31_BRAFL	C3Y338	C3YW31	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S8 family.	0.581
C3Y338_BRAFL	C3Z2M5_BRAFL	C3Y338	C3Z2M5	Uncharacterized protein.	Uncharacterized protein.	0.755
C3Y338_BRAFL	C3ZCE1_BRAFL	C3Y338	C3ZCE1	Uncharacterized protein.	C-type lectin domain-containing protein; Belongs to the peptidase S8 family.	0.581
C3Y339_BRAFL	C3Z2M5_BRAFL	C3Y339	C3Z2M5	Uncharacterized protein.	Uncharacterized protein.	0.400
C3Y985_BRAFL	C3YW30_BRAFL	C3Y985	C3YW30	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S8 family.	0.581
C3Y985_BRAFL	C3YW31_BRAFL	C3Y985	C3YW31	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S8 family.	0.581
C3Y985_BRAFL	C3Z2M5_BRAFL	C3Y985	C3Z2M5	Uncharacterized protein.	Uncharacterized protein.	0.755
C3Y985_BRAFL	C3ZCE1_BRAFL	C3Y985	C3ZCE1	Uncharacterized protein.	C-type lectin domain-containing protein; Belongs to the peptidase S8 family.	0.581
C3YBS3_BRAFL	C3YW30_BRAFL	C3YBS3	C3YW30	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S8 family.	0.581
C3YBS3_BRAFL	C3YW31_BRAFL	C3YBS3	C3YW31	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S8 family.	0.581
C3YBS3_BRAFL	C3Z2M5_BRAFL	C3YBS3	C3Z2M5	Uncharacterized protein.	Uncharacterized protein.	0.755
C3YBS3_BRAFL	C3ZCE1_BRAFL	C3YBS3	C3ZCE1	Uncharacterized protein.	C-type lectin domain-containing protein; Belongs to the peptidase S8 family.	0.581
C3YLS4_BRAFL	C3YW30_BRAFL	C3YLS4	C3YW30	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S8 family.	0.581
C3YLS4_BRAFL	C3YW31_BRAFL	C3YLS4	C3YW31	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S8 family.	0.581
C3YLS4_BRAFL	C3Z2M5_BRAFL	C3YLS4	C3Z2M5	Uncharacterized protein.	Uncharacterized protein.	0.755
C3YLS4_BRAFL	C3ZCE1_BRAFL	C3YLS4	C3ZCE1	Uncharacterized protein.	C-type lectin domain-containing protein; Belongs to the peptidase S8 family.	0.581
C3YW30_BRAFL	C3Y338_BRAFL	C3YW30	C3Y338	Uncharacterized protein; Belongs to the peptidase S8 family.	Uncharacterized protein.	0.581
C3YW30_BRAFL	C3Y985_BRAFL	C3YW30	C3Y985	Uncharacterized protein; Belongs to the peptidase S8 family.	Uncharacterized protein.	0.581
C3YW30_BRAFL	C3YBS3_BRAFL	C3YW30	C3YBS3	Uncharacterized protein; Belongs to the peptidase S8 family.	Uncharacterized protein.	0.581