10 items (Branchiostoma floridae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XXY6_BRAFL	MPN domain-containing protein. (311 aa)
	C3Y895_BRAFL	AAA domain-containing protein; Belongs to the AAA ATPase family. (407 aa)
	C3Z3L5_BRAFL	AAA domain-containing protein; Belongs to the AAA ATPase family. (392 aa)
	C3Z3L7_BRAFL	PCI domain-containing protein. (256 aa)
	C3Z7L1_BRAFL	PCI domain-containing protein. (452 aa)
	C3Z8E0_BRAFL	PCI domain-containing protein. (512 aa)
	C3ZA86_BRAFL	PCI domain-containing protein. (389 aa)
	C3ZF97_BRAFL	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (959 aa)
	C3ZPM6_BRAFL	PCI domain-containing protein. (427 aa)
	C3ZR59_BRAFL	AAA domain-containing protein; Belongs to the AAA ATPase family. (405 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XXY6_BRAFL	C3Y895_BRAFL	C3XXY6	C3Y895	MPN domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
C3XXY6_BRAFL	C3Z3L5_BRAFL	C3XXY6	C3Z3L5	MPN domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
C3XXY6_BRAFL	C3Z3L7_BRAFL	C3XXY6	C3Z3L7	MPN domain-containing protein.	PCI domain-containing protein.	0.999
C3XXY6_BRAFL	C3Z7L1_BRAFL	C3XXY6	C3Z7L1	MPN domain-containing protein.	PCI domain-containing protein.	0.999
C3XXY6_BRAFL	C3Z8E0_BRAFL	C3XXY6	C3Z8E0	MPN domain-containing protein.	PCI domain-containing protein.	0.999
C3XXY6_BRAFL	C3ZA86_BRAFL	C3XXY6	C3ZA86	MPN domain-containing protein.	PCI domain-containing protein.	0.999
C3XXY6_BRAFL	C3ZF97_BRAFL	C3XXY6	C3ZF97	MPN domain-containing protein.	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family.	0.999
C3XXY6_BRAFL	C3ZPM6_BRAFL	C3XXY6	C3ZPM6	MPN domain-containing protein.	PCI domain-containing protein.	0.999
C3XXY6_BRAFL	C3ZR59_BRAFL	C3XXY6	C3ZR59	MPN domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
C3Y895_BRAFL	C3XXY6_BRAFL	C3Y895	C3XXY6	AAA domain-containing protein; Belongs to the AAA ATPase family.	MPN domain-containing protein.	0.999
C3Y895_BRAFL	C3Z3L5_BRAFL	C3Y895	C3Z3L5	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
C3Y895_BRAFL	C3Z3L7_BRAFL	C3Y895	C3Z3L7	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
C3Y895_BRAFL	C3Z7L1_BRAFL	C3Y895	C3Z7L1	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
C3Y895_BRAFL	C3Z8E0_BRAFL	C3Y895	C3Z8E0	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
C3Y895_BRAFL	C3ZA86_BRAFL	C3Y895	C3ZA86	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
C3Y895_BRAFL	C3ZF97_BRAFL	C3Y895	C3ZF97	AAA domain-containing protein; Belongs to the AAA ATPase family.	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family.	0.999
C3Y895_BRAFL	C3ZPM6_BRAFL	C3Y895	C3ZPM6	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
C3Y895_BRAFL	C3ZR59_BRAFL	C3Y895	C3ZR59	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
C3Z3L5_BRAFL	C3XXY6_BRAFL	C3Z3L5	C3XXY6	AAA domain-containing protein; Belongs to the AAA ATPase family.	MPN domain-containing protein.	0.999
C3Z3L5_BRAFL	C3Y895_BRAFL	C3Z3L5	C3Y895	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999