6 items (Branchiostoma floridae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C3XZK0_BRAFL	Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance; Belongs to the MGME1 family. (205 aa)
	C3YHB0_BRAFL	Uncharacterized protein. (681 aa)
	C3ZBR2_BRAFL	Uncharacterized protein. (291 aa)
	C3ZJA5_BRAFL	N2227 domain-containing protein. (396 aa)
	C3ZM29_BRAFL	Uncharacterized protein. (227 aa)
	C3ZXK8_BRAFL	Uncharacterized protein. (864 aa)

Your Current Organism:

Branchiostoma floridae

NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3XZK0_BRAFL	C3ZJA5_BRAFL	C3XZK0	C3ZJA5	Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance; Belongs to the MGME1 family.	N2227 domain-containing protein.	0.502
C3XZK0_BRAFL	C3ZXK8_BRAFL	C3XZK0	C3ZXK8	Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance; Belongs to the MGME1 family.	Uncharacterized protein.	0.521
C3YHB0_BRAFL	C3ZJA5_BRAFL	C3YHB0	C3ZJA5	Uncharacterized protein.	N2227 domain-containing protein.	0.512
C3YHB0_BRAFL	C3ZM29_BRAFL	C3YHB0	C3ZM29	Uncharacterized protein.	Uncharacterized protein.	0.469
C3ZBR2_BRAFL	C3ZJA5_BRAFL	C3ZBR2	C3ZJA5	Uncharacterized protein.	N2227 domain-containing protein.	0.900
C3ZJA5_BRAFL	C3XZK0_BRAFL	C3ZJA5	C3XZK0	N2227 domain-containing protein.	Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance; Belongs to the MGME1 family.	0.502
C3ZJA5_BRAFL	C3YHB0_BRAFL	C3ZJA5	C3YHB0	N2227 domain-containing protein.	Uncharacterized protein.	0.512
C3ZJA5_BRAFL	C3ZBR2_BRAFL	C3ZJA5	C3ZBR2	N2227 domain-containing protein.	Uncharacterized protein.	0.900
C3ZJA5_BRAFL	C3ZXK8_BRAFL	C3ZJA5	C3ZXK8	N2227 domain-containing protein.	Uncharacterized protein.	0.538
C3ZM29_BRAFL	C3YHB0_BRAFL	C3ZM29	C3YHB0	Uncharacterized protein.	Uncharacterized protein.	0.469
C3ZXK8_BRAFL	C3XZK0_BRAFL	C3ZXK8	C3XZK0	Uncharacterized protein.	Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance; Belongs to the MGME1 family.	0.521
C3ZXK8_BRAFL	C3ZJA5_BRAFL	C3ZXK8	C3ZJA5	Uncharacterized protein.	N2227 domain-containing protein.	0.538